[Chimera-users] Association info

Eric Pettersen pett at cgl.ucsf.edu
Mon May 6 14:38:47 PDT 2019


Hi Hernando,
	If all you need to know is what structure associated with which sequence, the Multalign Viewer instance has an ‘associations’ attribute that is a dictionary of Molecule objects to Sequence objects.  Both of those objects have ’name’ attributes which could be printed out.  You don’t really describe what precise ‘association info’ you want to save, so I’m not sure if this meets your needs or not.  If not, let me know exactly what you want to save.

—Eric

	Eric Pettersen
	UCSF Computer Graphics Lab



> On May 6, 2019, at 11:43 AM, Hernando J Sosa <hernando.sosa at einstein.yu.edu> wrote:
> 
> Dear Chimera,
> 
> How can I save the Multialign viewer 'association info' to a file from a python script (I saw  a script  to save the sequence alignment in different formats but haven't seen how to save the association info).
> 
> Thanks
> 
> Hernando
> 
> 
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