[Chimera-users] visualizing distance restraints using Chimera

Elaine Meng meng at cgl.ucsf.edu
Tue Jul 16 10:03:47 PDT 2019


Hello Matthew Fountain,
See the ChimeraX plugin “Xlink Analyzer” available separately from this website:
<https://www.embl-hamburg.de/XlinkAnalyzer/XlinkAnalyzer.html>

… see also publication (open access):
Xlink Analyzer: software for analysis and visualization of cross-linking data in the context of three-dimensional structures.
Kosinski J, von Appen A, Ori A, Karius K, Müller CW, Beck M.
J Struct Biol. 2015 Mar;189(3):177-83.
<https://www.sciencedirect.com/science/article/pii/S1047847715000301>

I hope this helps,
Elaine
-----
Elaine C. Meng, Ph.D.                       
UCSF Chimera(X) team
Department of Pharmaceutical Chemistry
University of California, San Francisco

> On Jul 16, 2019, at 8:43 AM, Matthew Fountain <Matthew.Fountain at fredonia.edu> wrote:
> 
> Is there any way to import a list of distance restraints and have Chimera display them based on the restraint violation.
> -- 
> Matthew Fountain
> Professor and Chair
> Fredonia State University of New York
> Chemistry and Biochemistry Department





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