[Chimera-users] How to correct this error: ~/usr/chimera-1.12/lib/libgomp.so.1: version `GOMP_4.0' not found (required by /usr/lib/libopenbabel.so.4)
Francois Berenger
mlists at ligand.eu
Tue Nov 13 17:53:40 PST 2018
Hello,
On a Ubuntu 18.04.1 LTS, I get this error message when I start chimera.
Is there a known fix?
Am I running a too old version of chimera or should I run
a version specially compiled for Ubuntu computers?
Here is the full error message:
---
# chimera
Error while importing plipgui from
/home/berenger/.local/lib/python2.7/site-packages:
Traceback (most recent call last):
File
"/home/berenger/usr/chimera-1.12/share/chimera/extension/base.py", line
349, in _importExtension
__import__(module)
File
"/home/berenger/.local/lib/python2.7/site-packages/plipgui/ChimeraExtension.py",
line 8, in <module>
from plipgui.core import cmd_plip, cmd_unplip
File
"/home/berenger/.local/lib/python2.7/site-packages/plipgui/core.py",
line 50, in <module>
from plip.modules.preparation import PDBComplex
File
"/home/berenger/.local/lib/python2.7/site-packages/plip/modules/preparation.py",
line 13, in <module>
from .detection import *
File
"/home/berenger/.local/lib/python2.7/site-packages/plip/modules/detection.py",
line 12, in <module>
from .supplemental import *
File
"/home/berenger/.local/lib/python2.7/site-packages/plip/modules/supplemental.py",
line 26, in <module>
import pybel
File "/home/berenger/.local/lib/python2.7/site-packages/pybel.py",
line 53, in <module>
import openbabel as ob
File "/home/berenger/.local/lib/python2.7/site-packages/openbabel.py",
line 21, in <module>
_openbabel = swig_import_helper()
File "/home/berenger/.local/lib/python2.7/site-packages/openbabel.py",
line 20, in swig_import_helper
return importlib.import_module('_openbabel')
File
"/home/berenger/usr/chimera-1.12/lib/python2.7/importlib/__init__.py",
line 37, in import_module
__import__(name)
ImportError: /home/berenger/usr/chimera-1.12/lib/libgomp.so.1: version
`GOMP_4.0' not found (required by /usr/lib/libopenbabel.so.4)
---
Thanks a lot,
F.
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