[Chimera-users] Regarding saving image in chimera nogui

[NAGARAJAN]

Hi,

  Thanks for the quick reply. I have previous experience in using Chimera
GUI but not in nogui.

  The main thing that I dont know is to use those commands in nogui mode.

   For example: for saving image, I have used "runCommand("copy str.png") .
but it is now working

   Is there any link to get the informations to use commands in nogui mode

Thank you




On Fri, May 11, 2018 at 6:19 PM, Elaine Meng <meng at cgl.ucsf.edu> wrote:

> Hi,
> I guess you will be using commands.  Here are commands for your steps
> 1. open
> 2. surface
> 3. color
> 4, copy
> Of course, you will have to include more things in those commands, various
> options, residue numbers, filenames etc. that you should test in the GUI
> first to make sure they do what you want.  See also the list of commands
> for anything else you might want to do like rotate (turn) translate (move)
> zoom (scale) … and click on the link to see each command’s help with
> information about the command syntax and  possible options.
> <http://www.rbvi.ucsf.edu/chimera/docs/UsersGuide/framecommand.html>
>
> See also:
>  getting started with commands
> <http://www.rbvi.ucsf.edu/chimera/docs/UsersGuide/
> tutorials/getting_started.html>
>
>  tips for making nice images
> <http://www.rbvi.ucsf.edu/chimera/docs/UsersGuide/print.html#tips>
>
> I hope this helps,
> Elaine
> -----
> Elaine C. Meng, Ph.D.
> UCSF Chimera(X) team
> Department of Pharmaceutical Chemistry
> University of California, San Francisco
>
> > On May 11, 2018, at 4:09 PM, NAGARAJAN <nagabioinfostar at gmail.com>
> wrote:
> >
> > Hi all,
> >    I have to use chimera --nogui and do the following
> >
> >   1. load a structure
> >   2. make Surface representation
> >   3. Color surface of selected residues with a selected color
> >   4. save image
> >
> > Any idea how to do the 4 steps in chimera --nogui?
> > Thank you
>
>
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