[Chimera-users] saving new position of the model

[Elaine Meng]

Dear Dmitry,
For atomic models, of course: you can just specify saving transformed coordinates in the Save PDB or Save Mol2 dialog (or “write” command).
<http://www.rbvi.ucsf.edu/chimera/docs/UsersGuide/savemodel.html>

The rotating could be done by hand with the mouse or with commands “turn” or “roll."

However, I’m guessing you probably mean a map since that is more complicated.  As explained in the “Saving Maps After Fitting” link below, you would generally have to resample the map onto a different grid that has the axes oriented how you want:
<http://www.rbvi.ucsf.edu/chimera/docs/UsersGuide/savemodel.html#afterfitting>

I hope this helps,
Elaine
-----
Elaine C. Meng, Ph.D.                       
UCSF Chimera(X) team
Department of Pharmaceutical Chemistry
University of California, San Francisco

> On May 10, 2018, at 8:34 AM, Dmitry Semchonok <semchonok at gmail.com> wrote:
> 
> Dear colleagues, 
> Is there a way to rotate the model and than save it with a new x y z?
> Thank you
> Sincerely,
> Dmitry