[Chimera-users] select a specified residue
Elaine Meng
meng at cgl.ucsf.edu
Wed Jun 13 08:32:12 PDT 2018
Dear Zhengfeng
The simplest is to use the command line. There is a whole “atom specification" language for selecting or specifying certain models, chains, atoms. For example:
select :200
select #0:200.A
The first example selects all residues with number 200, the second example selects residue 200 in chain A of model 0. See “atom specification” description and many examples:
<http://www.rbvi.ucsf.edu/chimera/docs/UsersGuide/midas/frameatom_spec.html>
To learn more, you could try the “getting started” tutorials:
<http://www.rbvi.ucsf.edu/Outreach/Tutorials/GettingStarted.html>
<http://www.rbvi.ucsf.edu/chimera/docs/UsersGuide/tutorials/getting_started.html>
You can also show Sequence from the Favorites menu and select with the mouse in the sequence window.
<http://www.rbvi.ucsf.edu/chimera/docs/ContributedSoftware/multalignviewer/framemav.html>
I hope this helps,
Elaine
-----
Elaine C. Meng, Ph.D.
UCSF Chimera(X) team
Department of Pharmaceutical Chemistry
University of California, San Francisco
> On Jun 13, 2018, at 3:01 AM, 张征锋 <zhengfeng at mail.ccnu.edu.cn> wrote:
> Dear Sir,
> It is nice to use the amaizing software of UCSF Chimera. I can select a kind of residue such as all 'SER's and label them, while I am able to select a specified number of residue, such as the 200th residue 'Ser'. Could you please show me how to do with this? Thanks a lot.
> Best,
> zhengfeng
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