[Chimera-users] MD movie error

ChuHui Fu cfu at haverford.edu
Sun Jul 15 19:24:28 PDT 2018


Hi all,

When I was trying to use MD Movie option on the attached  pdb trajectory
file, chimera kept telling me that there were missing residues.

"Chimera Error
Residue 3864.het not in first model on line 126754 of
/homes/cfu/model1_sep_475.B_md_traj_system.pdb"

But I checked that the number of atoms in each one of the pdb files and
there didn't seem to be any missing. Then I separated the trajectory files
and use vimdiff to compare the models pairwise, but doesn't seem like there
are different residues, (unless I missed them).

Can anyone suggest what I might have done wrong?

​
 model1_sep_475.B_md_traj_system.pdb
<https://drive.google.com/a/haverford.edu/file/d/1w82K6a2FfLDzphcn6Jj2VwCjokFbXzqu/view?usp=drive_web>
​
Thanks!!

-- 
ChuHui Fu
B.S.Candidate in Chemistry
Haverford College, Class of 2019
cfu at haverford.edu
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