[Chimera-users] COX inhibitor demo discrepancy

simon chapman rowanlodge19 at gmail.com
Wed Sep 6 04:17:56 PDT 2017


Hi, I'm very impressed with Chimera as  a user of only 3 weeks so far

Trying out the various facilities has been a very useful exercise for
completing my Masters in MedChem.

However, when I emulated  the tutorial covering COX 1 and 2 inhibition,
inputting the molecules fluribrofen and SC558 I generated via DS Visualiser
bind at the outside edge of  the enzymes. Not centrally as displayed in the
video.

I also noted the molecular data in  ViewDock, ie: energies etc, is missing.
The table is blank other than the molecule number. Selecting 'Column' etc
has no effect. The 'H-bonds' option does display however.

I've probably done something  wrong, hey ho...but can you enlighten me?

Best wishes   Simon
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://plato.cgl.ucsf.edu/pipermail/chimera-users/attachments/20170906/08ce2627/attachment.html>


More information about the Chimera-users mailing list