[Chimera-users] color zone on command line

[Elaine Meng]

Hi Kyle,
Now there are Chimera commands to color zone and split by zone, so you could use them directly or via the python approach to run Chimera commands.
http://www.rbvi.ucsf.edu/chimera/docs/ProgrammersGuide/basicPrimer.html

For color zone, see “scolor zone”
http://www.rbvi.ucsf.edu/chimera/docs/UsersGuide/midas/scolor.html

Splitting a map by the resulting color zones is a little harder to find because it’s not a regular command but a keyboard shortcut “sm” … however, it can be run with the regular command “ac sm”
http://www.rbvi.ucsf.edu/chimera/docs/UsersGuide/midas/ac.html
http://www.rbvi.ucsf.edu/chimera/docs/ContributedSoftware/accelerators/alist.html

I hope this helps,
 Elaine
-----
Elaine C. Meng, Ph.D.                       
UCSF Computer Graphics Lab (Chimera team) and Babbitt Lab
Department of Pharmaceutical Chemistry
University of California, San Francisco

On Dec 22, 2016, at 1:57 PM, Kyle Morris <kylelmorris at berkeley.edu> wrote:

> Hi Chimera dev,
> Following on from this post back from 2009:
> 
> http://plato.cgl.ucsf.edu/pipermail/chimera-users/2009-January/003514.html
> 
> How would one also split map in this python script?
> Thanks!
> Kyle
>