[Chimera-users] Open .pse file in Chimera?
Robin
robinim30 at gmail.com
Tue Nov 3 20:10:04 PST 2015
Hello,
Can I open .rim files obtained of MD simulation from Yasara?
-Robin
On 4 November 2015 at 03:21, Elaine Meng <meng at cgl.ucsf.edu> wrote:
> Hi Dez,
> As you have found, Chimera does not read Pymol sessions. Maybe you can
> restore the Pymol session in Pymol, save the structure as PDB file(s) from
> Pymol, and then open the PDB file(s) in Chimera.
>
> Then see the “Fit in Map” tool and/or “fitmap” command in Chimera.
> <
> http://www.rbvi.ucsf.edu/chimera/docs/ContributedSoftware/fitmaps/fitmaps.html
> >
> <http://www.rbvi.ucsf.edu/chimera/docs/UsersGuide/midas/fitmap.html>
>
> I hope this helps,
> Elaine
> ----------
> Elaine C. Meng, Ph.D.
> UCSF Computer Graphics Lab (Chimera team) and Babbitt Lab
> Department of Pharmaceutical Chemistry
> University of California, San Francisco
>
> > On Nov 3, 2015, at 11:10 AM, Desiree Benefield <
> desiree.benefield at gmail.com> wrote:
> >
> > Dear all,
> > I have a .pse file generated with MacPyMOL that I would like to try to
> dock into a EM density map using Chimera. It would appear that this is not
> possible. Can you offer any advice or alternative approaches to try?
> > With many thanks,
> > Dez
>
>
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