[Chimera-users] Proposal to add ability to load CATH domains in Chimera
Tony Lewis
t.lewis at ucl.ac.uk
Mon Sep 29 07:27:43 PDT 2014
Dear Chimera people,
Many thanks to all Chimera contributors.
Please may I propose an addition to allow users to access our CATH domains
in the same way that they can currently access SCOP domains (
https://www.cgl.ucsf.edu/chimera/docs/UsersGuide/scop.html )?
PDBs for CATH domains can be loaded from URI's of the form:
http://data.cathdb.info/latest_release/pdb/1cukA01
For information, CATH domain IDs contain 7 digits:
- 1-4 : (eg 1cuk ) : PDB code
- 5 : (eg A ) : chain code
- 6-7 : (eg 01 ) : 2-digit domain number ( '00' for whole chain
domains )
We here at CATH would be very happy to provide any other information
required to implement this.
Many thanks for your help.
Kind regards,
Tony
Dr Tony Lewis
Orengo Group
UCL
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