[Chimera-users] Measure buried area

[Jian Guan]

Hi all,

I use measure command to calculate the buried area between capsomer and Fab.
My input file is pentamer.pdb and Fab.pdb. I made surface model for them
respectively and use the command line as shown below:

measure buriedArea #3 #2 probeRadius 1.4

However, it replied as "Surface calculation failed"

I tried also delete all non-binding units in the pentamer, it still can not
work. 

Does anyone know how to deal with that? Thank you so much.

Sincerely yours,

Jian

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