[Chimera-users] Command Patch problem

[mahad iou muddei addò]

Hi, i'm working with chimera for the first time. I need to patch 2
structures that i have the PDBs. I've already read the user guide and try
to follow the instructions for making a controlled superimposition of the
two structures.
These are my two sequence:

1)RKYVYSLYWSTLTLTTIGETPPPVRDSEYFFVVADFLIGVLIFATIVGNIGSMISNMNAARAEFQARIDAIKQYMHFR

2)DSSRRQYQEKYKQVEQYMSFHKLPADFRQKIHDYYEHRYQG-KMFDEDSILGELNGPLREKIVNFNCRKLVASMPLFANADPNFVTAMLTKLKFEVFQP
GDYIIREGTIGKKMYFIQHGVVSVLTK-NKEM--KLSDGSYFGEICLLT------RGRRTASVRADTYCRLYSLSVDN
FNEVLEEYPMMRRAFETVAIDRLDR/

I need to create a structure like this:

RKYVYSLYWSTLTLTTIGETPPPVRDSEYFFVVADFLIGVLIFATIVGNIGSMISNMNAARAEFQARIDAIKQYMHF
*RD*SSRRQYQEKYKQVEQYMSFH
KLPADFRQKIHDYYEHRYQG-KMFDEDSILGELNGPLREKIVNFNCRKLVASMPLFANADPNFVTAMLTKLKFEVFQP
GDYIIREGTIGKKMYFIQHGVVSVLTK-NKEM--KLSDGSYFGEICLLT------RGRRTASVRADTYCRLYSLSVDN
FNEVLEEYPMMRRAFETVAIDRLDR/

I know the position of the aa involved but after i launch the command
trough command line it gives me errors like

match #0:422 #1:442
Unequal numbers of atoms chosen for evalutation

What am i doing wrong?
Thanks, sincererly

Mahad
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