[Chimera-users] pseudo bond reader in command line

[M. Elizabeth Stroupe]

Hi,

I am trying to make a figure with pseudo bonds - the figure is fairly complicated and it will be a frame in a movie of related shots, so I need to call the pseudo bonds in from the command line.

How do I read in a text file that defines the pseudo bonds (as if from the pseudo bond reader) and then alter their attributes (to make them into dotted rather solid lines)?

Thanks much,

Beth