[Chimera-users] TER characters between residues in exported PDB ?

Marek Maly marek.maly at ujep.cz
Thu Jun 7 13:59:26 PDT 2012


OK,

  I just saw in my short look in given Chimera dialog that there is written  
only "File type: Prmtop" so
that a bit confused me...

   Thanks,

      Best wishes,

          Marek



Dne Thu, 07 Jun 2012 22:53:38 +0200 Elaine Meng <meng at cgl.ucsf.edu>  
napsal/-a:

> Hi Marek,
>
> On Jun 7, 2012, at 1:48 PM, Marek Maly wrote:
>
>> I also found (in actual alpha version) just possibility to save PRMTOP  
>> file but
>> both input files: PRMTOP (ff parameters) and INPCRD (atom coordinates)  
>> are necessary
>> to start simulation in Amber.
>
> This doesn't solve the other issues, but  I thought I should mention  
> that Write Prmtop saves both prmtop and inpcrd using the filename you  
> give it.
>
> Elaine
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