[Chimera-users] morphing model extrapolation

[Gajewski, Stefan]

Hi!

I have two .pdb files on hand. Both are in between two biologically relevant conformations. When I create a morph between them, I can see them permuting between the two crystal structures but only half way to the two relevant conformations.

The morphing model should generate a trajectory between the two coordinate sets. Is it possible to let the morphing model generate more coordinate files/frames beyond the target structure?  Let's say 120 frames morph A to B and compute 60-100 more frames beyond B based on the previous trajectories?

Thanks,
Stefan

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