[Chimera-users] Modelling of missing regions ussing Chimera

Elaine Meng meng at cgl.ucsf.edu
Wed Aug 8 11:20:09 PDT 2012


Hi Gleb!
I'm glad it worked well for you.

In the Chimera-Modeller dialog, you can browse to set the location.  However, it sounds like the real question is where to find the executable on your Linux system, and I don't know the answer to that part. On my Mac, it is /usr/bin/mod9.10 (which actually points to /Library/modeller-9.10/bin/mod9.10 ) ... is there a something like that under /usr/bin/ or /usr/lib/ on your machine?

Maybe the Modeller website has the answer...
<http://salilab.org/modeller/release.html>

...or maybe somebody who has used Modeller on Linux can comment.
Best,
Elaine
-----
Elaine C. Meng, Ph.D.                       
UCSF Computer Graphics Lab (Chimera team) and Babbitt Lab
Department of Pharmaceutical Chemistry
University of California, San Francisco

On Aug 7, 2012, at 1:15 AM, Gleb Novicov wrote:

> Dear Elaine!
> Thank you for your advises. Your new Modeller's module in new Chimera release works perfect.
> 
> Could you tell me how I could define path to the modeller local installation ? I have installed  Modeller on my Linux debian OS in the default locations. As I understood in that case Modeller is the part of the python modules. It's been installed both in the usr/lib/ and usr/include/ dirrs. Where the executable file is?
> Thanks again,
> Gleb





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