[Chimera-users] modeller interface

[Sadler, Evan]

Hi,

I'm trying to construct what I think should be a simple homology model and it's failing as below whether I use the web server or run modeller locally:

Target seq: VWF_CK
Template structures:
2TGI.pdb (#0)Run locally, the Modeller binary location: /Library/modeller-9.10/bin/mod9.10
Now, modeller is running locally...
<type 'exceptions.UnboundLocalError'> Exception in Tk callback
  Function: <function command at 0x17982770> (type: <type 'function'>)
  Args: ()
Traceback (innermost last):
  File "/Applications/Chimera.app/Contents/Resources/lib/python2.7/site-packages/Pmw/Pmw_1_3/lib/PmwBase.py", line 1747, in __call__
    return apply(self.func, args)
  File "/Applications/Chimera.app/Contents/Resources/share/chimera/baseDialog.py", line 449, in command
    getattr(s, buttonFuncName(txt))()
  File "/Applications/Chimera.app/Contents/Resources/share/chimera/baseDialog.py", line 700, in OK
    self.Apply()
  File "/Applications/Chimera.app/Contents/Resources/share/MultAlignViewer/ModellerDialog.py", line 579, in Apply
    veryFast=self.veryFastVar.get(), tempPath=self.pathTempOpt.get().strip(), **kw)
  File "/Applications/Chimera.app/Contents/Resources/share/MultAlignViewer/ModellerBase.py", line 247, in model
    if loopData:
<type 'exceptions.UnboundLocalError'>: local variable 'loopData' referenced before assignment

UnboundLocalError: local variable 'loopData' referenced before assignment

  File "/Applications/Chimera.app/Contents/Resources/share/MultAlignViewer/ModellerBase.py", line 247, in model
    if loopData:

See reply log for Python traceback.


My version of Chimera is alpha version 1.7 build 36205, running under Mac 10.6.8.

Do you have any advice?

Thanks,

Evan Sadler
--
J. Evan Sadler, M.D., Ph.D.
Chief, Division of Hematology
Department of Medicine
Washington University
660 S. Euclid Ave., Box 8125
St. Louis, MO   63110
Tel: 314-362-9067
FAX: 314-454-3012
email: esadler at wustl.edu

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