[Chimera-users] question regarding using molmap with symmetry option

Elaine Meng meng at cgl.ucsf.edu
Wed Sep 14 11:09:54 PDT 2011


Hi Janet!
It looks correct -- however, the molmap symmetry options were added after the 1.5.3 release, so the issue is probably that you need to get a newer version of Chimera (a daily build).
<http://plato.cgl.ucsf.edu/chimera/download.html#daily>

Changes since last production release, 1.5.3:
<http://plato.cgl.ucsf.edu/chimera/docs/relnotes/snapshot.html>

Best,
Elaine
-----
Elaine C. Meng, Ph.D.                       
UCSF Computer Graphics Lab (Chimera team) and Babbitt Lab
Department of Pharmaceutical Chemistry
University of California, San Francisco

On Sep 14, 2011, at 8:20 AM, Janet Iwasa wrote:

> Hello!
> I've been working with some virus models, and was hoping to use molmap with the symmetry option.  The main reason I'm not using multiscale models is so that I can create a single surface for several of the different chains in the capsid.  I've been having a little trouble getting this to work, and I'm not sure if I'm doing it correctly:
> 
> molmap :.A-C 10 symmetry biomt
> 
> Is this correct?  Doing this gives me the error: "Keyword 'symmetry' doesn't match any known keywords"
> 
> Advice?
> thanks,
> Janet





More information about the Chimera-users mailing list