[Chimera-users] problem in coloring a selected region

[Elaine Meng]

Hi Manish,
I was unable to reproduce this problem, at least using the Mac version (both 1.5.3 and current daily build).

I opened 1ha0, menu: Select... Sequence and entered TQNGGSNACKR, then menu: Actions... Color... blue.  Only the selected part was colored blue.  You could also do Favorites... Sequence to show the whole sequence and then select that part by dragging a box on that part of the sequence.

After selecting, you could also try command:
color blue sel

...instead of using the menu, but it is really doing the same thing.  Also, I see those residues are 131 to 141, so yet another way is to use the command:
color blue :131-141

If you still have trouble, however, please use "Help... Report a Bug" in the menu to report the problem.  Best,
Elaine
-----
Elaine C. Meng, Ph.D.                       
UCSF Computer Graphics Lab (Chimera team) and Babbitt Lab
Department of Pharmaceutical Chemistry
University of California, San Francisco


On Sep 9, 2011, at 8:16 PM, Manish Manish wrote:

> Dear Chimera Developer,
> 
> I want to select a region in protein molecule and then color. 
> 
> I have open a pdb file 1HA0 (attached), and then select a sequence TQNGGSNACKR (attached image)
> then color in blue (attached image). But this colors non selected part.
> 
> I am using ubuntu 11.04 natty,  
> VGA compatible controller: Intel Corporation Core Processor Integrated Graphics Controller (rev 18)
>     Subsystem: Dell Device 0447
>     Kernel driver in use: i915
>     Kernel modules: i915
> 
> and Chimera 1.5.3 .
> 
> Regards
> Manish