[Chimera-users] help with error message
Susan Tsutakawa
setsutakawa at lbl.gov
Mon Nov 28 12:52:25 PST 2011
I am opening up a pdb that has been generated after MD simulations. Waters have been removed.
I am getting an unusual error. I have two pdb files that were generated similarly, but only one gives me the error.
Traceback (most recent call last):
File "/Applications/Chimera.app/Contents/Resources/share/chimera/tkgui.py", line 343, in openPath
mols = chimera.openModels.open(path, type=ftype)
File "/Applications/Chimera.app/Contents/Resources/share/chimera/__init__.py", line 1541, in open
models = func(filename, *args, **kw)
File "/Applications/Chimera.app/Contents/Resources/share/chimera/__init__.py", line 770, in _openPDBModel
errOut=errLog)
error: radius must be positive
Error reading bfactor-911_changed.pdb:
error: radius must be positive
File "/Applications/Chimera.app/Contents/Resources/share/chimera/__init__.py", line 770, in _openPDBModel
errOut=errLog)
If someone can help, I would appreciate it.
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