[Chimera-users] define attribute error

[Eric Pettersen]

Hi Roberto,
	The atom specifiers you are using (the first of the two data columns)  
are incorrect.  For example, ":377.000000" selects residue 377 in  
chain 000000, which does not exist unless you have a spectacularly  
unusual structure.  :-)  You probably either want just ":377" (all  
residues numbered 377) or something like ":377.A" (residue 377 in  
chain A).
	Atom specifiers are discussed in detail here: http://www.cgl.ucsf.edu/chimera/current/docs/UsersGuide/midas/atom_spec.html

--Eric

                         Eric Pettersen
                         UCSF Computer Graphics Lab
                         http://www.cgl.ucsf.edu


On May 21, 2009, at 2:02 PM, Roberto Kopke Salinas wrote:

> Dear All,
>
> I am trying to color code a structure according to HetNOE. When I  
> load the attribute list using  "Define Attribute"  via the  
> "Structure Analysis" menu the program does not automatically  open  
> the "Render by Attribute" menu. If I click and open the "Render by  
> Attribute" menu, the program does not show my file in the attributes  
> list for residues.
>
> Does anyone have an idea of why this happen?
> I have pasted my attribute's list below.
>
> Thank you,
>
> Roberto
>
> attribute: teste
> recipient: residues
>     :377.000000    0.842818
>     :378.000000    1.273292
>     :379.000000    0.763398
>     :384.000000    0.852818
>     :387.000000    0.999787
>     :388.000000    0.572572
>     :389.000000    1.016109
>     :393.000000    0.950908
>     :397.000000    0.761818
>     :399.000000    0.712411
>     :402.000000    0.388721
>     :403.000000    0.495060
>     :408.000000    0.460664
>     :411.000000    0.973597
>     :412.000000    1.036187
>
> _______________________________________________
> Chimera-users mailing list
> Chimera-users at cgl.ucsf.edu
> http://www.cgl.ucsf.edu/mailman/listinfo/chimera-users

-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://plato.cgl.ucsf.edu/pipermail/chimera-users/attachments/20090521/8e4866d4/attachment.html>