[Chimera-users] Image not appearing
MIKALS,KYLE A
kmikals at ufl.edu
Thu Aug 27 07:58:49 PDT 2009
I made a code to make movie and two of the molecules are not
appearing in the saved output images. I put in the code where to
save them so if something went wrong.
This is the code I made and models 18 and 14 display in the window
while the code is running, but not in the saved images. I have no
idea what is going wrong. Any ideas? Here is my code below.
# start capturing frames, in .png format
movie record fformat png raytrace true directory
/msg/users/kmikals/Chimera_Files
#Created Label saying AAV Capsid Assembly
2dlabels create lab1 text 'AAV Capsid Assembly' color khaki size
28 xpos .2 ypos .94 visibility show
scale 1.008 50
#Starts action once previous command is complete
wait
modeldisplay#0
wait 5
turn y -1 35
wait 30
modeldisplay#17
turn y -.6 20
wait 30
modeldisplay#18
wait 30
turn y +1.4 35
wait 30
modeldisplay#3
~modeldisplay#0
~modeldisplay#17
~modeldisplay#18
wait 30
scale 0.992 50
wait 15
turn y -1 65
wait 9
modeldisplay#4
wait 9
turn y -1 35
modeldisplay#5
wait 9
turn y -1 65
modeldisplay#10
wait 9
modeldisplay#9
wait 9
turn y -1 65
modeldisplay#14
wait 9
modeldisplay#11
wait 9
turn y -0.5 30
modeldisplay#12
wait 9
turn y -1 65
modeldisplay#13
wait 9
modeldisplay#6
turn y -1 65
wait 9
modeldisplay#7
wait 9
modeldisplay#8
2dlabels delete lab1
#hide_all_molecules
~modeldisplay#3
~modeldisplay#4
~modeldisplay#5
~modeldisplay#6
~modeldisplay#7
~modeldisplay#8
~modeldisplay#9
~modeldisplay#10
~modeldisplay#11
~modeldisplay#12
~modeldisplay#13
~modeldisplay#14
wait 20
scale 0.987
modeldisplay#16
turn y -.3 20
wait
turn x -.75 35
wait 30
turn x .75 35
wait 30
turn x -.38 35
wait
turn y -1 35
wait 30
turn y 2 180
wait
turn x 2 180
wait
# stop recording frames
movie stop
# write status information to reply log
movie status
# encode a movie in mp4 format from recorded frames
movie encode mformat mp4 output /msg/users/kmikals/Chimera_Files
--
MIKALS,KYLE A
Biochemistry
University of Florida
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