[Chimera-users] problem of sleap for solvation

[Dr. Jean-Didier Maréchal]

Dear all,

I tried yesterday's build on windows and tested the solvation plugin. 
I had a first crash that reply log message I give here:

	command:  ['C:\\Archivos de
programa\\Chimera\\bin\\amber10\\exe\\sleap', '-f',
'd:\\docume~1\\jean\\config~1\\temp\\tmp7wpvvm\\solvate.cmd']
	Running sleap command: C:\Archivos de
programa\Chimera\bin\amber10\exe\sleap -f
d:\docume~1\jean\config~1\temp\tmp7wpvvm\solvate.cmd
	Failure running sleap 
	Check reply log for details

Running C:\Archivos de programa\Chimera\bin\amber10\exe\sleap alone, I saw
that cygwin1.dll was missing. So I installed it in the same directory. 

Then came a second crash:

	tempDir:  d:\docume~1\jean\config~1\temp\tmp6m0sm0
	command:  ['C:\\Archivos de
programa\\Chimera\\bin\\amber10\\exe\\sleap', '-f',
'd:\\docume~1\\jean\\config~1\\temp\\tmp6m0sm0\\solvate.cmd']
	Running sleap command: C:\Archivos de
programa\Chimera\bin\amber10\exe\sleap -f
d:\docume~1\jean\config~1\temp\tmp6m0sm0\solvate.cmd
	(solvate) [gtkleap]$ source leaprc.ff03
	(solvate) Error: can not find file leaprc.ff03 in all the search
path.
	Failure running sleap 
	Check reply log for details

Though I located the leaprc.ff03 file in another directory and copied it in
the running one, I can not pass over this problem.

All the best! 

JD


***************************************************
Dr. Jean-Didier Maréchal
Lecturer
Computational Bioorganic and Bioionorganic Chemistry @ Transmet
Unitat de Química Física
Departament de Química
Universitat Autònoma de Barcelona
Edifici C.n.
08193 Cerdanyola (Barcelona)
Tel: +34.935814936
e-mail: JeanDidier.Marechal at uab.es