[Chimera-users] building a alpha helix

Anindito Sen emailanindito at yahoo.co.in
Tue Nov 18 12:55:25 PST 2008


Dear All



I was wondering if there is any tool by which can generate an alpha
helix, as an extension of a truncated crystal structure docked in the
density map. The possibility of the truncated portion of the protein
behaving as an alpha helix has been predicted by different groups. The
density map shows some empty regions (after the crystal structure has
been docked) just good enough for an alpha helix to fit in.



Best

Andy

Dr. Anindito Sen (Ph.D) Research Associate , Dept. of Biochemistry and Molecular Genetics University of Virginia Box 800733 Charlottesville, VA 22908



      
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