[Chimera-users] chimera segmentation fault

Selami ERCAN ercanselami at gmail.com
Mon Mar 31 10:28:21 PDT 2008


hi. i'm using chimera-1.2470-linux_x86_64.exe on suse 10.3. in addition
to this my graphic card is nvidia geforce 8600m gt 512 mb and also i
have installed mesa and xorg softwares.
and here is problem: using 1EP4.pdb from rcsb.org causes
problem.whenever i select structure-->main, then action-->surface-->show
it crashes. and it gives the report shown below.

Copyright M.F. Sanner (March 2000)
Compilation flags
WARNING: class_arete2: warning hole in a reentrant face 17081
WARNING: class_arete2: warning hole in a reentrant face 22603
WARNING: classe_aretes1: No cycle in face 25771 (nba=-4)

WARNING: classe_aretes1: No cycle in face 25772 (nba=-1)

WARNING: classe_aretes1: No cycle in face 25774 (nba=-1)

WARNING: classe_aretes1: No cycle in face 25776 (nba=-3)

WARNING: classe_aretes1: No cycle in face 25779 (nba=-1)

WARNING: classe_aretes1: No cycle in face 25781 (nba=-1)

WARNING: classe_aretes1: No cycle in face 25783 (nba=-1)

WARNING: classe_aretes1: No cycle in face 25785 (nba=-1)

WARNING: classe_aretes1: No cycle in face 25787 (nba=-1)

WARNING: classe_aretes1: No cycle in face 25789 (nba=-1)

RESTART FROM SES: 1
radius of atom 2855 goes from 1.760000 to 1.860000
radius of atom 2857 goes from 1.640000 to 1.740000
radius of atom 2858 goes from 1.760000 to 1.860000
radius of atom 2871 goes from 1.880000 to 1.980000
radius of atom 6942 goes from 1.880000 to 1.980000
radius of atom 6945 goes from 1.760000 to 1.860000
radius of atom 6946 goes from 1.760000 to 1.860000
radius of atom 6947 goes from 1.760000 to 1.860000
radius of atom 6948 goes from 1.760000 to 1.860000
radius of atom 6987 goes from 1.460000 to 1.560000
radius of atom 6988 goes from 1.760000 to 1.860000
Partial mode
Segmentation fault



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