[Chimera-users] When structures and density maps don't align

[Thomas Goddard]

Hi Wally,

   The CCP4 map file has alignment information in its header.  The CCP4 
maplib documentation describes the header:

	http://www.ccp4.ac.uk/html/maplib.html

The problem could be that Chimera ignores the SKWMAT and SKWTRN fields.

   Could you send me a CCP4 map and PDB that align in COOT but not in 
Chimera and I will figure it out?

   Thanks,

	Tom