[Chimera-users] dock-prep problem with Zn and K ions

Eric Pettersen pett at cgl.ucsf.edu
Mon Oct 8 11:23:56 PDT 2007


I can run Dock Prep on a PDB file containing zinc (1zip) without the  
problem you're getting.  Can you tell me what PDB you're using, and  
what version of Chimera?

--Eric

                         Eric Pettersen
                         UCSF Computer Graphics Lab
                         pett at cgl.ucsf.edu
                         http://www.cgl.ucsf.edu

On Oct 8, 2007, at 10:54 AM, zzj wrote:

> Hi there,
> I am preparing dock6 files in Chimera using the Dockprep option. The
> Zn and K ions in the PDB files are giving me problems at the point of
> adding hydrogen. Everthing works fine if I remove these ion atoms.
> Here is the Chimera Error message:
> AttributeError: addHinfoDialog instance has no attribute "cancerlCB".
> I can select and highlight these ions without problem. I tried to give
> different names for the ions. Nothing worked.
> Any suggestion is highly appreciated!
> -Joe
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