[Chimera-users] Ramachandran Plots

[Eric Pettersen]

This and other types of important types of MD analysis are are my to- 
do list, but I really don't have a good idea as to when I'll have  
time to implement them.  Until then, as Eric Dawson mentioned in his  
reply, MDdisplay offers this capability.

--Eric

                         Eric Pettersen
                         UCSF Computer Graphics Lab
                         http://www.cgl.ucsf.edu

On Nov 15, 2007, at 8:53 PM, Quinton Dowling wrote:

> Hi,
> I am interested in creating a ramachandran plot from an md trajectory.
>  Particularly I would like to track the change in phi/psi angles over
> time for specific amino acids throughout the md in a fashion that is
> easily presentable.  Is there a way to do this with Chimera?  Or any
> way at all?  Thanks a bunch.
>
> Quinton Dowling
> Research Computing Center
> The College of Idaho
> Caldwell ID 83605
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