[Chimera-users] Please consider adding PyTables to Chimera
David E. Konerding
dekonerding at lbl.gov
Mon Apr 3 15:06:21 PDT 2006
Hello,
Recently I have been converting most of my scientific data to the HDF5
format. HDF5 is a powerful, high performance data format library.
I found an absolutely wonderful open source code, PyTables, which
provides an HDF5 interface. It adds enormous value to HDF5
by making it much easier to use, and exposing a lot of the complex
functionality that HDF5 supports (such as variable-length records).
http://www.pytables.org/moin
I would really appreciate it if you guys would consider adding
PyTables. I would definitely convert a lot of my existing extensions
and processing tools
to use PyTables- for example, when I analyze trajectories to find
hydrogen bond data and use that to render long movies, PyTables
makes it a lot easier (I already used the Chimera headers to build my
own copy of PyTables on Linux, but it would be a lot more painful to do
on Windows).
PyTables depends on numarray (although it also provides Numeric Python
support). I'd like to see numarray in Chimera as well
(although I could live with just Numeric support)
Dave
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