[Chimera-users] mmaker

[Bryan W. Lepore]

hi Eric

On Mon, 2 May 2005, Eric Pettersen wrote:
> 	mmaker is a command for use in Chimera's "internal" command
> line...

ok,...

> It can be included inside scripts that are run from the Unix command
> line though.

so like this?:

#!/bin/bash
chimera --nogui << eof
mmaker
file1.pdb
file2.pdb
eof

this fails, but there's no output, hence the email.

> 	If you briefly outlined what you want to do, I could provide better 
> advice about your best approach.

take a list of .ent files and generate a superposition-based sequence
alignment.  i can do this ok with the gui.

-bryan