Just fixed Re: [Chimera-users] WinXP SP1 python error on File -> Open

Pattanayek, Sabuj sabuj.pattanayek at Vanderbilt.Edu
Fri Sep 17 11:18:47 PDT 2004


Hi,

I just tried this and it fixed the problem:

Delete these directories:
C:\Documents and Settings\All Users\Application Data\chimera
C:\Documents and Settings\sabuj\Application Data\chimera (whatever your username
may be)

Then uninstall and reinstall chimera and file->open works again.

Thanks,
...Sabuj


Quoting "Pattanayek, Sabuj" <sabuj.pattanayek at vanderbilt.edu>:

> Hi,
> 
> I'm getting a strange error when I start chimera and do file->open. This is
> the
> reply log:
> 
> ValueError: list.index(x): x not in list
> (see reply log for Python traceback info)
> Traceback (most recent call last):
>   File "C:\Program Files\Chimera\share\__main__.py", line 56, in ?
>     value = chimeraInit.init(sys.argv)
>   File "C:\Program Files\Chimera\share\chimeraInit.py", line 301, in init
>     tkgui.eventLoop()
>   File "C:\Program Files\Chimera\share\chimera\tkgui.py", line 2891, in
> eventLoop
>     app.mainloop()
>   File "C:\Program Files\Chimera\bin\lib\lib-tk\Tkinter.py", line 965, in
> mainloop
>     self.tk.mainloop(n)
>   File "C:\Program
> Files\Chimera\bin\lib\site-packages\Pmw\Pmw_1_2\lib\PmwBase.py", line 1751,
> in
> __call__
>     _reporterror(self.func, args)
>   File "C:\Program
> Files\Chimera\bin\lib\site-packages\Pmw\Pmw_1_2\lib\PmwBase.py", line 1814,
> in
> _reporterror
>     displayerror(msg)
>   File "C:\Program
> Files\Chimera\bin\lib\site-packages\Pmw\Pmw_1_2\lib\PmwBase.py", line 1377,
> in
> displayerror
>     _errorReportFile.write(text + '\n')
>   File "C:\Program
> Files\Chimera\bin\lib\site-packages\Pmw\Pmw_1_2\lib\PmwBase.py", line 1747,
> in
> __call__
>     return apply(self.func, args)
>   File "C:\Program Files\Chimera\share\chimera\tkgui.py", line 272, in
> _importModel
>     clientSticky='ew')
>   File "C:\Program Files\Chimera\share\chimera\tkgui.py", line 178, in
> __init__
>     OpenModeless.__init__(self, **kw)
>   File "C:\Program Files\Chimera\share\OpenSave\__init__.py", line 185, in
> __init__
>     ModelessBase.__init__(self, **self.dialogKw)
>   File "C:\Program Files\Chimera\share\chimera\baseDialog.py", line 378, in
> __init__
>     BaseDialog.__init__(self, master, *args, **kw)
>   File "C:\Program Files\Chimera\share\chimera\baseDialog.py", line 220, in
> __init__
>     self.fillInUI(self.__top)
>   File "C:\Program Files\Chimera\share\chimera\tkgui.py", line 181, in
> fillInUI
>     OpenModeless.fillInUI(self, parent)
>   File "C:\Program Files\Chimera\share\OpenSave\__init__.py", line 92, in
> fillInUI
>     self.millerBrowser = MillerBrowser(parent, **self.millerKw)
>   File "C:\Program Files\Chimera\share\OpenSave\miller.py", line 184, in
> __init__
>     self.makeMainColumn(initialdir, firstTime=1)
>   File "C:\Program Files\Chimera\share\OpenSave\miller.py", line 509, in
> makeMainColumn
>     titleMode=None, firstTime=firstTime)
>   File "C:\Program Files\Chimera\share\OpenSave\miller.py", line 823, in
> __init__
>     index = normItems.index(
> ValueError: list.index(x): x not in list
> 
> I have also posted the screenshot here
> http://linegli.mc.vanderbilt.edu/~sabuj/chimeraOpenError.jpg
> 
> Also if I do "c:\Program Files\Chimera\bin\chimera.exe" file.pdb from the
> command line, then do file -> open, it works again. I've tried running it
> with
> and without precompiling modules after installation, but get the same
> result.
> 
> I've downloaded the binary installation several times, done uninstall, then
> install, but I'm still getting the same error. I have not been able to
> re-create
> the error on another winxp sp1 machine.
> 
> Any help would be appreciated,
> Thanks,
> Sabuj Pattanayek
> _______________________________________________
> Chimera-users mailing list
> Chimera-users at cgl.ucsf.edu
> http://www.cgl.ucsf.edu/mailman/listinfo/chimera-users
> 


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