[chimera-dev] Fwd: RBVI web update results
Eric Pettersen
pett at cgl.ucsf.edu
Wed Feb 22 08:56:49 PST 2023
For whoever is responsible for the "createPub" script...
> Begin forwarded message:
>
> From: root <root at cgl.ucsf.EDU>
> Subject: RBVI web update results
> Date: February 22, 2023 at 4:04:54 AM PST
> To: pett at cgl.ucsf.edu
>
> Traceback (most recent call last):
> File "/usr/local/bin/createPub", line 188, in <module>
> main()
> File "/usr/local/bin/createPub", line 46, in main
> htmlList = formatIds(idList, url)
> File "/usr/local/bin/createPub", line 99, in formatIds
> output.extend(bufferPid(url, idBuffer, flush=True))
> File "/usr/local/bin/createPub", line 109, in bufferPid
> data = formatPubmedId(idBuffer, url)
> File "/usr/local/bin/createPub", line 124, in formatPubmedId
> esr = eSummaryResult.eSummaryResult(data)
> File "/usr/local/lib/python2.7/site-packages/ncbi_eutils/eSummaryResult.py", line 43, in __init__
> raise ExpatError
> xml.parsers.expat.ExpatError
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