[chimera-dev] neighbors

Eric Pettersen pett at cgl.ucsf.edu
Tue Mar 12 09:39:48 PDT 2013


On Mar 12, 2013, at 8:27 AM, Elisabeth Ortega wrote:

> Dear Chimera Dev. Team,
> 
> 
> There is any way to select the neighbors of a selected atom without drawing the bond?  
> If it is not possible... could you tell me how draw and erase bonds using a python function?  

Hi Elisabeth,
	So you want to select some atoms without selecting the bonds between them.

chimera.selection.addCurrent([atoms])

will add the given atoms to the selection shown in the graphics window without adding the bonds between them.  There is a separate function for adding "implied" elements such as the bonds between selected atoms:  chimera.selection.addImpliedCurrent().
	I hope this is what you meant!

--Eric

	Eric Pettersen
	UCSF Computer Graphics Lab



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