[chimera-dev] Chimera Problem

Elaine Meng meng at cgl.ucsf.edu
Tue Feb 19 10:15:36 PST 2013


Hi Neil,
I can fetch P11229 with no problem, both from UniProt (which will just get the sequence + sequence annotations), and from ModBase (which will get homology models for this sequence, built using the ModBase pipeline).  The latter gives me 29 models!

So I have no idea what could be wrong.  All I can say is to choose "File... Fetch by ID" from the menu, and in the fetch dialog choose Database: UniProt or ModBase, and then be careful to enter P11229 correctly into the type-in ID field next to that choice.
Elaine
----------
Elaine C. Meng, Ph.D. 
UCSF Computer Graphics Lab (Chimera team) and Babbitt Lab
Department of Pharmaceutical Chemistry
University of California, San Francisco

P.S. chimera-dev is for programming questions.  General user questions should be sent to chimera-users at cgl.ucsf.edu, problem reports to chimera-bugs at cgl.ucsf.edu
<http://www.cgl.ucsf.edu/chimera/docs/feedback.html>

On Feb 14, 2013, at 11:28 AM, Neil Bugeja wrote:

> Dear Sir/Madam
> I am using Chimera as part of my thesis. I need to find a homology model for the human muscarinic M1 receptor. However, it always tells me service is down or an error when loading from uniprot.
> 
> Am I doing something wrong? The Uniprot ID is P11229 and I get fetch ID failed
> Thanks
> Neil Bugeja





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