<html>
<head>
<!-- BaNnErBlUrFlE-HeAdEr-start -->
<meta name="viewport" content="width=device-width, initial-scale=1.0">
<style>
.pfptBannerTableMSO { padding: 0px 12px 5px 12px; width: 100%;border-radius:4px;border-top:4px solid #90a4ae;background-color:#D0D8DC; }
.pfptTitleMSO { color:#000000 !important;font-family: 'Arial', sans-serif !important;font-weight:bold !important;font-size:14px !important; }
.pfptSubtitleMSO { font-size:12px !important; font-family: 'Arial', sans-serif !important; }
.pfptButtonMSO { mso-padding-alt: 7.5px; padding: 7.5px; text-decoration: none; font-family: 'Arial', sans-serif !important; font-size: 14px; line-height: 40px; border-radius:2px; }
.pfptPrimaryButtonMSO {
border: 1.5px solid #666666; color: #000000;
}
.pfptBanner {
margin: 15px 14px 30px 14px;
padding: 8px 16px 8px 16px;
border-radius: 4px;
min-width: 200px;
background-color: #D0D8DC;
border-top: 4px solid #90a4ae;
}
.pfptBannerTitle {
color: #000000;
font-family: 'Arial', sans-serif;
font-size: 14px;
font-weight: bold;
line-height: 18px;
display: block;
}
.pfptBannerSubtitle {
color: #000000;
font-weight: normal;
font-family: 'Arial', sans-serif;
font-size: 12px;
line-height: 18px;
margin-top: 2px;
display: block;
}
.pfptButton {
display: inline-block;
font-family: 'Arial', sans-serif;
font-size: 14px;
font-weight: normal;
border-radius: 2px;
padding: 7.5px 16px;
margin: 3px 0 3px 16px;
white-space: nowrap;
width: fit-content;
}
.pfptPrimaryButton {
border: 1px solid #666666;
}
.pfptPrimaryButton:hover, .pfptPrimaryButton:focus {
background-color: #b4c1c7;
}
.pfptPrimaryButton:active {
background-color: #90a4ae;
}
.pfptMessageContainer {
display: inline-block;
margin: 0px 0px 1px 0px;
max-width: 600px;
}
.pfptButtonGroup {
float: right;
margin: 0px 0px 0px 16px;
text-align: right;
width: fit-content;
}
.pfptPreheader { display:none !important; visibility:hidden; mso-hide:all; font-size:1px; line-height:1px; max-height:0px; max-width:0px; opacity:0; overflow:hidden; }
</style>
<!-- BaNnErBlUrFlE-HeAdEr-end -->
<meta http-equiv="Content-Type" content="text/html; charset=us-ascii">
<style type="text/css" style="display:none;"> P {margin-top:0;margin-bottom:0;} </style>
</head>
<body dir="ltr">
<!-- BaNnErBlUrFlE-BoDy-start -->
<!-- Preheader Text : BEGIN -->
<span class="pfptPreheader" style="display:none !important;visibility:hidden;mso-hide:all;font-size:1px;color:#ffffff;line-height:1px;max-height:0px;max-width:0px;opacity:0;overflow:hidden;">
Dear Eric, Thanks for the response. it is possible that the cxc file was a txt file type( windows) . i will check it. thanks amith From: Eric Pettersen <pett@cgl.ucsf.edu> Sent: Tuesday, February 8, 2022 9:40 AM
</span>
<!-- Preheader Text : END -->
<!-- Email Banner : BEGIN -->
<span style="display:none !important;visibility:hidden;mso-hide:all;font-size:1px;color:#ffffff;line-height:1px;max-height:0px;max-width:0px;opacity:0;overflow:hidden;">ZjQcmQRYFpfptBannerStart</span>
<!--[if ((ie)|(mso))]>
<table border="0" cellspacing="0" cellpadding="0" width="100%" style="padding: 3px 0px 16px 0px; direction: ltr" lang="en"><tr><td>
<table class="pfptBannerTableMSO" border="0" cellspacing="0" cellpadding="0" style="padding: 0px 10px 5px 6px; width: 100%;border-radius:4px;border-top:4px solid #90a4ae;background-color:#D0D8DC;"><tr><td valign="top">
<table align="left" border="0" cellspacing="0" cellpadding="0" style="padding: 4px 8px 4px 8px">
<tr><td><span class="pfptTitleMSO" style="color:#000000 !important;font-family: 'Arial', sans-serif;font-weight:bold !important;font-size:14px !important; direction: ltr">
This Message Is From an External Sender
</span></td></tr>
<tr><td><span class="pfptSubtitleMSO" style="color:#000000 !important;font-weight:normal !important;font-family: 'Arial', sans-serif; font-size:12px !important; direction: ltr">
This message came from outside your organization.
</span></td></tr>
</table>
</td></tr></table>
</td></tr></table>
<![endif]-->
<![if !((ie)|(mso))]>
<div dir="ltr" lang="en" class="pfptBanner" style="margin:16px 0px 16px 0px; padding:8px 16px 8px 16px; border-radius: 4px; min-width: 200px;background-color: #D0D8DC; border-top: 4px solid #90a4ae;">
<div class="pfptMessageContainer" style="display: inline-block; margin: 0px 0px 1px 0px; max-width: 600px;">
<div class="pfptBannerTitle" style="color:#000000 !important;font-family: 'Arial', sans-serif !important;font-weight:bold !important;font-size:14px !important;line-height:18px;display:block;">
This Message Is From an External Sender
</div>
<div class="pfptBannerSubtitle" style="color:#000000 !important;font-weight:normal !important;font-family: 'Arial', sans-serif !important;font-size:12px !important;line-height:18px;margin-top:2px;display:block">
This message came from outside your organization.
</div>
</div>
</div>
<![endif]>
<div style="display:none !important;visibility:hidden;mso-hide:all;font-size:1px;color:#ffffff;line-height:1px;max-height:0px;max-width:0px;opacity:0;overflow:hidden;">ZjQcmQRYFpfptBannerEnd</div>
<!-- Email Banner : END -->
<!-- BaNnErBlUrFlE-BoDy-end -->
<div style="font-family: Calibri, Arial, Helvetica, sans-serif; font-size: 12pt; color: rgb(0, 0, 0); background-color: rgb(255, 255, 255);">
Dear Eric,</div>
<div style="font-family: Calibri, Arial, Helvetica, sans-serif; font-size: 12pt; color: rgb(0, 0, 0); background-color: rgb(255, 255, 255);">
<br>
</div>
<div style="font-family: Calibri, Arial, Helvetica, sans-serif; font-size: 12pt; color: rgb(0, 0, 0); background-color: rgb(255, 255, 255);">
Thanks for the response.<br>
it is possible that the cxc file was a txt file type( windows) . i will check it.</div>
<div style="font-family: Calibri, Arial, Helvetica, sans-serif; font-size: 12pt; color: rgb(0, 0, 0); background-color: rgb(255, 255, 255);">
<br>
</div>
<div style="font-family: Calibri, Arial, Helvetica, sans-serif; font-size: 12pt; color: rgb(0, 0, 0); background-color: rgb(255, 255, 255);">
thanks</div>
<div style="font-family: Calibri, Arial, Helvetica, sans-serif; font-size: 12pt; color: rgb(0, 0, 0); background-color: rgb(255, 255, 255);">
amith</div>
<div id="appendonsend"></div>
<hr style="display:inline-block;width:98%" tabindex="-1">
<div id="divRplyFwdMsg" dir="ltr"><font face="Calibri, sans-serif" style="font-size:11pt" color="#000000"><b>From:</b> Eric Pettersen <pett@cgl.ucsf.edu><br>
<b>Sent:</b> Tuesday, February 8, 2022 9:40 AM<br>
<b>To:</b> Rangarajan, Amith <Amith.Rangarajan@ucsf.edu><br>
<b>Cc:</b> ChimeraX Users Help <ChimeraX-users@cgl.ucsf.edu><br>
<b>Subject:</b> Re: [chimerax-users] error with open :: 'foreach' has no suffix</font>
<div> </div>
</div>
<style>
<!--
.x_pfptBannerTableMSO
{padding:0px 12px 5px 12px;
width:100%;
border-radius:4px;
border-top:4px solid #90a4ae;
background-color:#D0D8DC}
.x_pfptTitleMSO
{color:#000000!important;
font-family:'Arial',sans-serif!important;
font-weight:bold!important;
font-size:14px!important}
.x_pfptSubtitleMSO
{font-size:12px!important;
font-family:'Arial',sans-serif!important}
.x_pfptButtonMSO
{padding:7.5px;
text-decoration:none;
font-family:'Arial',sans-serif!important;
font-size:14px;
line-height:40px;
border-radius:2px}
.x_pfptPrimaryButtonMSO
{border:1.5px solid #666666;
color:#000000}
.x_pfptBanner
{margin:15px 14px 30px 14px;
padding:8px 16px 8px 16px;
border-radius:4px;
min-width:200px;
background-color:#D0D8DC;
border-top:4px solid #90a4ae}
.x_pfptBannerTitle
{color:#000000;
font-family:'Arial',sans-serif;
font-size:14px;
font-weight:bold;
line-height:18px;
display:block}
.x_pfptBannerSubtitle
{color:#000000;
font-weight:normal;
font-family:'Arial',sans-serif;
font-size:12px;
line-height:18px;
margin-top:2px;
display:block}
.x_pfptButton
{display:inline-block;
font-family:'Arial',sans-serif;
font-size:14px;
font-weight:normal;
border-radius:2px;
padding:7.5px 16px;
margin:3px 0 3px 16px;
white-space:nowrap;
width:fit-content}
.x_pfptPrimaryButton
{border:1px solid #666666}
.x_pfptMessageContainer
{display:inline-block;
margin:0px 0px 1px 0px;
max-width:600px}
.x_pfptButtonGroup
{float:right;
margin:0px 0px 0px 16px;
text-align:right;
width:fit-content}
.x_pfptPreheader
{display:none!important;
visibility:hidden;
font-size:1px;
line-height:1px;
max-height:0px;
max-width:0px;
opacity:0;
overflow:hidden}
-->
</style>
<div class="" style="word-wrap:break-word; line-break:after-white-space"><span class="x_pfptPreheader" style="display:none!important; visibility:hidden; font-size:1px; color:#ffffff; line-height:1px; max-height:0px; max-width:0px; opacity:0; overflow:hidden">Hi
Amith, That error message indicates to me that the first file name (script.cxc) isn't being recognized as a ChimeraX command script file. So take a hard look at the command you typed and make sure that the suffix for that file is ".cxc" and
</span><span style="display:none!important; visibility:hidden; font-size:1px; color:#ffffff; line-height:1px; max-height:0px; max-width:0px; opacity:0; overflow:hidden">ZjQcmQRYFpfptBannerStart</span>
<div dir="ltr" lang="en" class="x_pfptBanner" style="margin:16px 0px 16px 0px; padding:8px 16px 8px 16px; border-radius:4px; min-width:200px; background-color:#D0D8DC; border-top:4px solid #90a4ae">
<div class="x_pfptMessageContainer" style="display:inline-block; margin:0px 0px 1px 0px; max-width:600px">
<div class="x_pfptBannerTitle" style="color:#000000!important; font-family:'Arial',sans-serif!important; font-weight:bold!important; font-size:14px!important; line-height:18px; display:block">
This Message Is From an External Sender </div>
<div class="x_pfptBannerSubtitle" style="color:#000000!important; font-weight:normal!important; font-family:'Arial',sans-serif!important; font-size:12px!important; line-height:18px; margin-top:2px; display:block">
This message came from outside your organization. </div>
</div>
</div>
<div style="display:none!important; visibility:hidden; font-size:1px; color:#ffffff; line-height:1px; max-height:0px; max-width:0px; opacity:0; overflow:hidden">
ZjQcmQRYFpfptBannerEnd</div>
Hi Amith,
<div class=""><span class="x_Apple-tab-span" style="white-space:pre"></span>That error message indicates to me that the first file name (script.cxc) isn't being recognized as a ChimeraX command script file. So take a hard look at the command you typed and
make sure that the suffix for that file is ".cxc" and not something mistyped like ".cxs" or whatnot.</div>
<div class=""><br class="">
</div>
<div class="">
<div class="">--Eric</div>
<div class=""><br class="">
</div>
<div class=""><span class="x_Apple-tab-span" style="white-space:pre"></span>Eric Pettersen</div>
<div class=""><span class="x_Apple-tab-span" style="white-space:pre"></span>UCSF Computer Graphics Lab</div>
</div>
<div class=""><br class="">
<div><br class="">
<blockquote type="cite" class="">
<div class="">On Feb 8, 2022, at 6:25 AM, Rangarajan, Amith via ChimeraX-users <<a href="mailto:chimerax-users@cgl.ucsf.edu" class="">chimerax-users@cgl.ucsf.edu</a>> wrote:</div>
<br class="x_Apple-interchange-newline">
<div class="">
<div dir="ltr" lang="en" class="x_pfptBanner" style="margin:16px 0px; padding:8px 16px; border-top-left-radius:4px; border-top-right-radius:4px; border-bottom-right-radius:4px; border-bottom-left-radius:4px; min-width:200px; background-color:rgb(208,216,220); border-top-width:4px; border-top-style:solid; border-top-color:rgb(144,164,174); font-family:Helvetica; font-size:12px; font-style:normal; font-variant-caps:normal; font-weight:normal; letter-spacing:normal; text-align:start; text-indent:0px; text-transform:none; white-space:normal; word-spacing:0px; text-decoration:none">
<div class="x_pfptMessageContainer" style="display:inline-block; margin:0px 0px 1px; max-width:600px">
<div class="x_pfptBannerTitle" style="line-height:18px; display:block; font-family:Arial,sans-serif!important; font-size:14px!important; font-weight:bold!important">
This Message Is From an External Sender</div>
<div class="x_pfptBannerSubtitle" style="line-height:18px; margin-top:2px; display:block; font-weight:normal!important; font-family:Arial,sans-serif!important; font-size:12px!important">
This message came from outside your organization.</div>
</div>
</div>
<div class="" style="font-style:normal; font-variant-caps:normal; font-weight:normal; letter-spacing:normal; text-align:start; text-indent:0px; text-transform:none; white-space:normal; word-spacing:0px; text-decoration:none; font-family:Calibri,Arial,Helvetica,sans-serif; font-size:12pt; background-color:rgb(255,255,255)">
Hi,</div>
<div class="" style="font-style:normal; font-variant-caps:normal; font-weight:normal; letter-spacing:normal; text-align:start; text-indent:0px; text-transform:none; white-space:normal; word-spacing:0px; text-decoration:none; font-family:Calibri,Arial,Helvetica,sans-serif; font-size:12pt; background-color:rgb(255,255,255)">
<br class="">
</div>
<div class="" style="font-style:normal; font-variant-caps:normal; font-weight:normal; letter-spacing:normal; text-align:start; text-indent:0px; text-transform:none; white-space:normal; word-spacing:0px; text-decoration:none; font-family:Calibri,Arial,Helvetica,sans-serif; font-size:12pt; background-color:rgb(255,255,255)">
I am trying to run a script and want to use foreach ( open script.cxc foreach *.pdb) to iterate through several pdb files in the working directory.</div>
<div class="" style="font-style:normal; font-variant-caps:normal; font-weight:normal; letter-spacing:normal; text-align:start; text-indent:0px; text-transform:none; white-space:normal; word-spacing:0px; text-decoration:none; font-family:Calibri,Arial,Helvetica,sans-serif; font-size:12pt; background-color:rgb(255,255,255)">
<br class="">
</div>
<div class="" style="font-style:normal; font-variant-caps:normal; font-weight:normal; letter-spacing:normal; text-align:start; text-indent:0px; text-transform:none; white-space:normal; word-spacing:0px; text-decoration:none; font-family:Calibri,Arial,Helvetica,sans-serif; font-size:12pt; background-color:rgb(255,255,255)">
I had no issues with running it earlier, but since last few tries, i am getting an error stating that ""'foreach' has no suffix""</div>
<div class="" style="font-style:normal; font-variant-caps:normal; font-weight:normal; letter-spacing:normal; text-align:start; text-indent:0px; text-transform:none; white-space:normal; word-spacing:0px; text-decoration:none; font-family:Calibri,Arial,Helvetica,sans-serif; font-size:12pt; background-color:rgb(255,255,255)">
<br class="">
</div>
<div class="" style="font-style:normal; font-variant-caps:normal; font-weight:normal; letter-spacing:normal; text-align:start; text-indent:0px; text-transform:none; white-space:normal; word-spacing:0px; text-decoration:none; font-family:Calibri,Arial,Helvetica,sans-serif; font-size:12pt; background-color:rgb(255,255,255)">
I am not able to figure out how to debug this. </div>
<div class="" style="font-style:normal; font-variant-caps:normal; font-weight:normal; letter-spacing:normal; text-align:start; text-indent:0px; text-transform:none; white-space:normal; word-spacing:0px; text-decoration:none; font-family:Calibri,Arial,Helvetica,sans-serif; font-size:12pt; background-color:rgb(255,255,255)">
<br class="">
</div>
<div class="" style="font-style:normal; font-variant-caps:normal; font-weight:normal; letter-spacing:normal; text-align:start; text-indent:0px; text-transform:none; white-space:normal; word-spacing:0px; text-decoration:none; font-family:Calibri,Arial,Helvetica,sans-serif; font-size:12pt; background-color:rgb(255,255,255)">
I am using the latest build of chimerax.</div>
<div class="" style="font-style:normal; font-variant-caps:normal; font-weight:normal; letter-spacing:normal; text-align:start; text-indent:0px; text-transform:none; white-space:normal; word-spacing:0px; text-decoration:none; font-family:Calibri,Arial,Helvetica,sans-serif; font-size:12pt; background-color:rgb(255,255,255)">
<br class="">
</div>
<div class="" style="font-style:normal; font-variant-caps:normal; font-weight:normal; letter-spacing:normal; text-align:start; text-indent:0px; text-transform:none; white-space:normal; word-spacing:0px; text-decoration:none; font-family:Calibri,Arial,Helvetica,sans-serif; font-size:12pt; background-color:rgb(255,255,255)">
I will highly appreciate your suggestions on fixing this.</div>
<div class="" style="font-style:normal; font-variant-caps:normal; font-weight:normal; letter-spacing:normal; text-align:start; text-indent:0px; text-transform:none; white-space:normal; word-spacing:0px; text-decoration:none; font-family:Calibri,Arial,Helvetica,sans-serif; font-size:12pt; background-color:rgb(255,255,255)">
<br class="">
</div>
<div class="" style="font-style:normal; font-variant-caps:normal; font-weight:normal; letter-spacing:normal; text-align:start; text-indent:0px; text-transform:none; white-space:normal; word-spacing:0px; text-decoration:none; font-family:Calibri,Arial,Helvetica,sans-serif; font-size:12pt; background-color:rgb(255,255,255)">
best</div>
<div class="" style="font-style:normal; font-variant-caps:normal; font-weight:normal; letter-spacing:normal; text-align:start; text-indent:0px; text-transform:none; white-space:normal; word-spacing:0px; text-decoration:none; font-family:Calibri,Arial,Helvetica,sans-serif; font-size:12pt; background-color:rgb(255,255,255)">
amith</div>
<span class="" style="font-family:Helvetica; font-size:12px; font-style:normal; font-variant-caps:normal; font-weight:normal; letter-spacing:normal; text-align:start; text-indent:0px; text-transform:none; white-space:normal; word-spacing:0px; text-decoration:none; float:none; display:inline!important">_______________________________________________</span><br class="" style="font-family:Helvetica; font-size:12px; font-style:normal; font-variant-caps:normal; font-weight:normal; letter-spacing:normal; text-align:start; text-indent:0px; text-transform:none; white-space:normal; word-spacing:0px; text-decoration:none">
<span class="" style="font-family:Helvetica; font-size:12px; font-style:normal; font-variant-caps:normal; font-weight:normal; letter-spacing:normal; text-align:start; text-indent:0px; text-transform:none; white-space:normal; word-spacing:0px; text-decoration:none; float:none; display:inline!important">ChimeraX-users
mailing list</span><br class="" style="font-family:Helvetica; font-size:12px; font-style:normal; font-variant-caps:normal; font-weight:normal; letter-spacing:normal; text-align:start; text-indent:0px; text-transform:none; white-space:normal; word-spacing:0px; text-decoration:none">
<a href="mailto:ChimeraX-users@cgl.ucsf.edu" class="" style="font-family:Helvetica; font-size:12px; font-style:normal; font-variant-caps:normal; font-weight:normal; letter-spacing:normal; orphans:auto; text-align:start; text-indent:0px; text-transform:none; white-space:normal; widows:auto; word-spacing:0px">ChimeraX-users@cgl.ucsf.edu</a><br class="" style="font-family:Helvetica; font-size:12px; font-style:normal; font-variant-caps:normal; font-weight:normal; letter-spacing:normal; text-align:start; text-indent:0px; text-transform:none; white-space:normal; word-spacing:0px; text-decoration:none">
<span class="" style="font-family:Helvetica; font-size:12px; font-style:normal; font-variant-caps:normal; font-weight:normal; letter-spacing:normal; text-align:start; text-indent:0px; text-transform:none; white-space:normal; word-spacing:0px; text-decoration:none; float:none; display:inline!important">Manage
subscription:</span><br class="" style="font-family:Helvetica; font-size:12px; font-style:normal; font-variant-caps:normal; font-weight:normal; letter-spacing:normal; text-align:start; text-indent:0px; text-transform:none; white-space:normal; word-spacing:0px; text-decoration:none">
<a href="https://www.rbvi.ucsf.edu/mailman/listinfo/chimerax-users" class="" style="font-family:Helvetica; font-size:12px; font-style:normal; font-variant-caps:normal; font-weight:normal; letter-spacing:normal; orphans:auto; text-align:start; text-indent:0px; text-transform:none; white-space:normal; widows:auto; word-spacing:0px">https://www.rbvi.ucsf.edu/mailman/listinfo/chimerax-users</a></div>
</blockquote>
</div>
<br class="">
</div>
</div>
</body>
</html>