<html><head><meta http-equiv="Content-Type" content="text/html; charset=utf-8"></head><body style="word-wrap: break-word; -webkit-nbsp-mode: space; line-break: after-white-space;" class="">Hi Yumeng,<div class=""><br class=""></div><div class=""> It would be useful if ChimeraX could report the per-residue correlation of an atomic model with a map as Phenix can do. I'll made a feature request for that</div><div class=""><br class=""></div><div class=""><span class="Apple-tab-span" style="white-space:pre"> </span><a href="https://www.rbvi.ucsf.edu/trac/ChimeraX/ticket/5897" class="">https://www.rbvi.ucsf.edu/trac/ChimeraX/ticket/5897</a></div><div class=""><br class=""></div><div class="">You can make feature requests yourself using ChimeraX menu entry Help / Report a Bug.... Bugs and feature requests go into our ChimeraX issue tracking database.</div><div class=""><br class=""></div><div class=""> There is a ChimeraX plugin called StrudelScore from the EMDB that gives per-residue fit statistics. You can get the plugin using ChimeraX menu Tools / More Tools.... There is online documentation here</div><div class=""><br class=""></div><div class=""><span class="Apple-tab-span" style="white-space:pre"> </span><a href="https://cxtoolshed.rbvi.ucsf.edu/apps/chimeraxstrudelscore" class="">https://cxtoolshed.rbvi.ucsf.edu/apps/chimeraxstrudelscore</a></div><div class=""><br class=""></div><div class="">and a tutorial</div><div class=""><br class=""></div><div class=""><span class="Apple-tab-span" style="white-space:pre"> </span><a href="https://ftp.ebi.ac.uk/pub/databases/emdb_vault/strudel_tutorials/introduction_3dstrudel/Introduction_to_3dstrudel.pdf" class="">https://ftp.ebi.ac.uk/pub/databases/emdb_vault/strudel_tutorials/introduction_3dstrudel/Introduction_to_3dstrudel.pdf</a></div><div class=""><br class=""></div><div class="">Also there is a ChimeraX command resfit that lets you look at the fit of each residue in the density, moving a slider to go to the next residue. It can also make a video, here is an example,</div><div class=""><br class=""></div><div class=""><a href="https://www.rbvi.ucsf.edu/chimera/data/sbgrid-apr2017/images/resfit.mp4" class=""><span class="Apple-tab-span" style="white-space:pre"> </span>https://www.rbvi.ucsf.edu/chimera/data/sbgrid-apr2017/images/resfit.mp4</a></div><div class=""><br class=""></div><div class=""><span class="Apple-tab-span" style="white-space:pre"> </span><a href="https://www.rbvi.ucsf.edu/chimera/data/sbgrid-apr2017/cryomovie.html" class="">https://www.rbvi.ucsf.edu/chimera/data/sbgrid-apr2017/cryomovie.html</a></div><div class=""><br class=""></div><div class="">and here is resfit command documentation</div><div class=""><br class=""></div><div class=""><span class="Apple-tab-span" style="white-space:pre"> </span><a href="https://www.cgl.ucsf.edu/chimerax/docs/user/commands/resfit.html" class="">https://www.cgl.ucsf.edu/chimerax/docs/user/commands/resfit.html</a></div><div class=""><br class=""></div><div class=""> Tom</div><div class=""><br class=""></div><div class="">Example of resfit command display of residue fit to map.<br class=""><div><img apple-inline="yes" id="C2E2C365-5D87-495C-AA2B-A0EE66A3BCA6" width="648" height="672" src="cid:13D079DB-133F-43E8-B4C1-B93A15DF3A03" class=""><br class=""><blockquote type="cite" class=""><div class="">On Jan 10, 2022, at 3:48 PM, Yumeng Yan <<a href="mailto:yumeng.yan@cpr.ku.dk" class="">yumeng.yan@cpr.ku.dk</a>> wrote:</div><br class="Apple-interchange-newline"><div class=""><div id="divtagdefaultwrapper" dir="ltr" style="font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; font-size: 12pt; font-family: Calibri, Helvetica, sans-serif;" class=""><div style="margin-top: 0px; margin-bottom: 0px;" class="">Hi Tom, </div><div style="margin-top: 0px; margin-bottom: 0px;" class=""><br class=""></div><div style="margin-top: 0px; margin-bottom: 0px;" class="">Many thanks for your reply. It works follow your suggestion. I can not open ChimeraX in the gui mode while the ChimeraX is installed on a remote cluster and I did not configure it correctly, so bad. Another question, could you add the <span style="color: rgb(33, 33, 33); font-family: wf_segoe-ui_normal, "Segoe UI", "Segoe WP", Tahoma, Arial, sans-serif, serif, EmojiFont; font-size: 15px;" class="">measure correlation with cc output for each residue in the structure like in Phenix?</span></div><div style="margin-top: 0px; margin-bottom: 0px;" class=""><span style="color: rgb(33, 33, 33); font-family: wf_segoe-ui_normal, "Segoe UI", "Segoe WP", Tahoma, Arial, sans-serif, serif, EmojiFont; font-size: 15px;" class=""><br class=""></span></div><div style="margin-top: 0px; margin-bottom: 0px;" class=""><span style="color: rgb(33, 33, 33); font-family: wf_segoe-ui_normal, "Segoe UI", "Segoe WP", Tahoma, Arial, sans-serif, serif, EmojiFont; font-size: 15px;" class="">Best,</span></div><div style="margin-top: 0px; margin-bottom: 0px;" class=""><span style="color: rgb(33, 33, 33); font-family: wf_segoe-ui_normal, "Segoe UI", "Segoe WP", Tahoma, Arial, sans-serif, serif, EmojiFont; font-size: 15px;" class="">Yumeng</span></div><div style="margin-top: 0px; margin-bottom: 0px;" class=""><span style="color: rgb(33, 33, 33); font-family: wf_segoe-ui_normal, "Segoe UI", "Segoe WP", Tahoma, Arial, sans-serif, serif, EmojiFont; font-size: 15px;" class=""><br class=""></span></div></div><hr tabindex="-1" style="caret-color: rgb(0, 0, 0); font-family: Helvetica; font-size: 18px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; display: inline-block; width: 658.546875px;" class=""><span style="caret-color: rgb(0, 0, 0); font-family: Helvetica; font-size: 18px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; float: none; display: inline !important;" class=""></span><div id="divRplyFwdMsg" dir="ltr" style="caret-color: rgb(0, 0, 0); font-family: Helvetica; font-size: 18px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none;" class=""><font face="Calibri, sans-serif" style="font-size: 11pt;" class=""><b class="">From:</b><span class="Apple-converted-space"> </span>Tom Goddard <<a href="mailto:goddard@sonic.net" class="">goddard@sonic.net</a>><br class=""><b class="">Sent:</b><span class="Apple-converted-space"> </span>Tuesday, January 11, 2022 12:38:42 AM<br class=""><b class="">To:</b><span class="Apple-converted-space"> </span>Yumeng Yan<br class=""><b class="">Cc:</b><span class="Apple-converted-space"> </span><a href="mailto:chimerax-users@cgl.ucsf.edu" class="">chimerax-users@cgl.ucsf.edu</a><br class=""><b class="">Subject:</b><span class="Apple-converted-space"> </span>Re: [chimerax-users] No cc when using fitmap</font><div class=""> </div></div><div style="caret-color: rgb(0, 0, 0); font-family: Helvetica; font-size: 18px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none;" class=""><table border="0" cellspacing="0" cellpadding="0" width="100%" align="left" style="border: 0px; display: table; width: 672px; table-layout: fixed; float: none;" class=""><tbody class=""><tr class=""><td valign="middle" width="1px" bgcolor="#A6A6A6" cellpadding="7px 2px 7px 2px" style="padding: 7px 2px; background-color: rgb(166, 166, 166);" class=""></td><td valign="middle" width="100%" bgcolor="#EAEAEA" cellpadding="7px 5px 7px 15px" style="width: 562px; background-color: rgb(234, 234, 234); padding: 7px 5px 7px 15px; font-family: wf_segoe-ui_normal, "Segoe UI", "Segoe WP", Tahoma, Arial, sans-serif; font-size: 12px; font-weight: normal; color: rgb(33, 33, 33); text-align: left; word-wrap: break-word;" class=""><div class="">You don't often get email from<span class="Apple-converted-space"> </span><a href="mailto:goddard@sonic.net" class="">goddard@sonic.net</a>.<span class="Apple-converted-space"> </span><a href="http://aka.ms/LearnAboutSenderIdentification" class="">Learn why this is important</a></div></td><td valign="middle" align="left" width="75px" bgcolor="#EAEAEA" cellpadding="7px 5px 7px 5px" style="width: 75px; background-color: rgb(234, 234, 234); padding: 7px 5px; font-family: wf_segoe-ui_normal, "Segoe UI", "Segoe WP", Tahoma, Arial, sans-serif; font-size: 12px; font-weight: normal; color: rgb(33, 33, 33); text-align: left; word-wrap: break-word;" class=""></td></tr></tbody></table><div class="">Hi Yumeng,<div class=""><br class=""></div><div class=""> I would not expect any difference in the correlation coefficient between Windows and Linux or with a large map versus a small map.</div><div class=""><br class=""></div><div class=""> First the command you listed does not do any fitting since you use "shift false rotate false" which does not allow the model to move.</div><div class=""><div class=""><br class=""></div><div class=""><span class="Apple-tab-span" style="white-space: pre;"></span>fitmap #2 inMap #1 resolution 4.0 metric correlation shift false rotate false</div><div class=""><br class=""></div><div class="">So I assume you are doing this just to measure the correlation coefficient. And your output says the correlation coefficient is 0. That most likely means the atomic model is not located in the map. Why don't you just do the same steps in gui mode and see what happens -- it should produce exactly the same result as nogui mode. Also note that the displayed surface level matters because by default fitmap only uses data above the contour level of the displayed surface of the map you are fitting into. That actually may explain why your large map case did not work, because if you open a large map ChimeraX may initially just show a single plane in gray scale instead of a surface, and with no surface it won't have a surface level. So to get a predictable result you should use the volume command to show a surface of the full map and set the threshold level you want to use, for example,</div><div class=""><br class=""></div><div class=""> volume #1 style surface region all level 0.2</div><div class=""><br class=""></div><div class=""> I see that ChimeraX does not have the "measure correlation" command that is in the older Chimera program. I will try to add that.</div><div class=""><br class=""></div><div class=""> Tom</div><div class=""><br class=""></div><div class=""><br class=""></div><div class=""><br class=""></div><div class=""><br class=""><blockquote type="cite" class=""><div class="">On Jan 10, 2022, at 2:14 PM, Yumeng Yan via ChimeraX-users <<a href="mailto:chimerax-users@cgl.ucsf.edu" class="">chimerax-users@cgl.ucsf.edu</a>> wrote:</div><br class="Apple-interchange-newline"><div class=""><div id="divtagdefaultwrapper" dir="ltr" class="" style="font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; font-size: 12pt; font-family: Calibri, Helvetica, sans-serif;"><div class="" style="margin-top: 0px; margin-bottom: 0px;">Hi, </div><div class="" style="margin-top: 0px; margin-bottom: 0px;"><br class=""></div><div class="" style="margin-top: 0px; margin-bottom: 0px;">When I tried to use<b class=""> fitmap</b> function ChimeraX in<span class="Apple-converted-space"> </span><b class="">Linux with --nogui option, </b><span class="Apple-converted-space"> </span>I got no CC output when the Cryo-EM map is large(1.6GB) and I think in this<span class="Apple-converted-space"> </span><span class="">situation, the local fit did not work. When the map was cut of a half size, it works. But it works well on Windows. Could you<span class="Apple-converted-space"> </span> help me?</span></div><div class="" style="margin-top: 0px; margin-bottom: 0px;"><span class=""><br class=""></span></div><div class="" style="margin-top: 0px; margin-bottom: 0px;"><span class="">Here are the commands:</span></div><p class="" style="margin-top: 0px; margin-bottom: 0px;"><span class=""></span></p><div class="">open ../Basplt_ext_cryosparc_P48_J130_003_volume_map_sharp_local_center.mrc fit_11.pdb</div><div class="">fitmap #2 inMap #1 resolution 4.0 metric correlation shift false rotate false</div><div class=""><br class=""></div>Here is the log information:<p class="" style="margin-top: 0px; margin-bottom: 0px;"></p><p class="" style="margin-top: 0px; margin-bottom: 0px;"><span class=""></span></p><div class="">INFO:</div><div class="">UCSF ChimeraX version: 1.4.dev202201082018 (2022-01-08)</div><div class="">INFO:</div><div class="">© 2016-2021 Regents of the University of California. All rights reserved.</div><div class="">INFO:</div><div class="">Executing: open .33092SymAndFit.cxc</div><div class="">INFO:</div><div class="">Executing: open ../Basplt_ext_cryosparc_P48_J130_003_volume_map_sharp_local_center.mrc fit_11.pdb</div><div class="">STATUS:</div><div class="">reading Basplt_ext_cryosparc_P48_J130_003_volume_map_sharp_local_center.mrc 1.6 Gb 0%</div><div class="">STATUS:</div><div class="">reading Basplt_ext_cryosparc_P48_J130_003_volume_map_sharp_local_center.mrc 1.6 Gb 8%</div><div class="">STATUS:</div><div class="">reading Basplt_ext_cryosparc_P48_J130_003_volume_map_sharp_local_center.mrc 1.6 Gb 16%</div><div class="">STATUS:</div><div class="">reading Basplt_ext_cryosparc_P48_J130_003_volume_map_sharp_local_center.mrc 1.6 Gb 24%</div><div class="">STATUS:</div><div class="">reading Basplt_ext_cryosparc_P48_J130_003_volume_map_sharp_local_center.mrc 1.6 Gb 32%</div><div class="">STATUS:</div><div class="">reading Basplt_ext_cryosparc_P48_J130_003_volume_map_sharp_local_center.mrc 1.6 Gb 40%</div><div class="">STATUS:</div><div class="">reading Basplt_ext_cryosparc_P48_J130_003_volume_map_sharp_local_center.mrc 1.6 Gb 48%</div><div class="">STATUS:</div><div class="">reading Basplt_ext_cryosparc_P48_J130_003_volume_map_sharp_local_center.mrc 1.6 Gb 56%</div><div class="">STATUS:</div><div class="">reading Basplt_ext_cryosparc_P48_J130_003_volume_map_sharp_local_center.mrc 1.6 Gb 64%</div><div class="">STATUS:</div><div class="">reading Basplt_ext_cryosparc_P48_J130_003_volume_map_sharp_local_center.mrc 1.6 Gb 72%</div><div class="">STATUS:</div><div class="">reading Basplt_ext_cryosparc_P48_J130_003_volume_map_sharp_local_center.mrc 1.6 Gb 80%</div><div class="">STATUS:</div><div class="">reading Basplt_ext_cryosparc_P48_J130_003_volume_map_sharp_local_center.mrc 1.6 Gb 87%</div><div class="">STATUS:</div><div class="">Done reading Basplt_ext_cryosparc_P48_J130_003_volume_map_sharp_local_center.mrc</div><div class="">STATUS:</div><div class="">Computing histogram for Basplt_ext_cryosparc_P48_J130_003_volume_map_sharp_local_center.mrc</div><div class="">STATUS:</div><div class="">Computing Basplt_ext_cryosparc_P48_J130_003_volume_map_sharp_local_center.mrc surface, level 0.292</div><div class="">STATUS:</div><div class="">Calculated Basplt_ext_cryosparc_P48_J130_003_volume_map_sharp_local_center.mrc surface, level 0.292, with 10911480 triangles</div><div class="">INFO:</div><div class="">Opened Basplt_ext_cryosparc_P48_J130_003_volume_map_sharp_local_center.mrc as #1, grid size 750,750,750, pixel 1.1, shown at level 0.292, step 1, values float32</div><div class="">INFO:</div><div class="">Chain information for fit_11.pdb #2</div><div class="">---</div><div class="">Chain | Description</div><div class="">[F](cxcmd:select /F:2-219 "Select chain") | [No description</div><div class="">available](cxcmd:sequence chain #2/F "Show sequence")</div><div class=""><br class=""></div><div class=""><br class=""></div><div class="">INFO:</div><div class="">Executing: fitmap #2 inMap #1 resolution 8.0 metric correlation shift false rotate false</div><div class="">INFO:</div><div class="">Opened fit_11.pdb map 8 as #3, grid size 40,42,43, pixel 2.67, shown at level 0.0533, step 1, values float32</div><div class="">INFO:</div><div class="">Fit map fit_11.pdb map 8 in map Basplt_ext_cryosparc_P48_J130_003_volume_map_sharp_local_center.mrc using 2211 points</div><div class=""> correlation = 0, correlation about mean = 0, overlap = 0</div><div class=""> steps = 24, shift = 0, angle = 0 degrees</div><div class=""><br class=""></div><div class="">INFO:</div><div class="">Position of fit_11.pdb map 8 (#3) relative to Basplt_ext_cryosparc_P48_J130_003_volume_map_sharp_local_center.mrc (#1) coordinates:</div><div class=""> Matrix rotation and translation</div><div class=""> 1.00000000 0.00000000 0.00000000 0.00000000</div><div class=""> 0.00000000 1.00000000 0.00000000 0.00000000</div><div class=""> 0.00000000 0.00000000 1.00000000 0.00000000</div><div class=""> Axis 0.00000000 0.00000000 1.00000000</div><div class=""> Axis point 0.00000000 0.00000000 0.00000000</div><div class=""> Rotation angle (degrees) 0.00000000</div><div class=""> Shift along axis 0.00000000</div><div class=""><br class=""></div><div class="">STATUS:</div><div class="">24 steps, shift 0, rotation 0 degrees, correlation 0.0000</div><div class=""><br class=""></div><br class=""><p class="" style="margin-top: 0px; margin-bottom: 0px;"></p><div class="" style="margin-top: 0px; margin-bottom: 0px;"><span class="">Best wishes, </span></div><div class="" style="margin-top: 0px; margin-bottom: 0px;"><span class="">Yumeng</span></div><div class="" style="margin-top: 0px; margin-bottom: 0px;"><br class=""></div><div id="Signature" class=""><div id="divtagdefaultwrapper" dir="ltr" class="" style="font-size: 12pt; font-family: Calibri, Helvetica, sans-serif, EmojiFont, "Apple Color Emoji", "Segoe UI Emoji", NotoColorEmoji, "Segoe UI Symbol", "Android Emoji", EmojiSymbols;"><p class="" style="margin-top: 0px; margin-bottom: 0px;"></p><p class="x_MsoNormal" style="margin: 0cm; font-size: 12pt; font-family: Calibri, sans-serif; color: rgb(33, 33, 33); line-height: 8pt;"><span lang="EN-US" class="" style="font-size: 7.5pt; font-family: Verdana, sans-serif, serif, EmojiFont; color: gray;"></span></p><div class="" style="color: rgb(33, 33, 33); font-family: wf_segoe-ui_normal, "Segoe UI", "Segoe WP", Tahoma, Arial, sans-serif, serif, EmojiFont; 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font-family: wf_segoe-ui_normal, "Segoe UI", "Segoe WP", Tahoma, Arial, sans-serif, serif, EmojiFont; font-size: 15px; margin: 0px;"><font size="3" class="" style="font-family: Calibri, sans-serif, serif, EmojiFont;"><span class="" style="font-size: 12pt;"><font size="1" color="gray" class="" style="font-family: Verdana, sans-serif, serif, EmojiFont;"><span class="" style="font-size: 7.5pt;"><br class="">Blegdamsvej 3B, building 6</span></font><font size="1" color="gray" class="" style="font-family: Verdana, sans-serif, serif, EmojiFont;"><span class="" style="font-size: 7.5pt;"><br class="">2200 Copenhagen N</span></font><font size="1" color="gray" class="" style="font-family: Verdana, sans-serif, serif, EmojiFont;"><span class="" style="font-size: 7.5pt;"><br class="">DENMARK</span></font></span></font></div><div class="" style="color: rgb(33, 33, 33); font-family: wf_segoe-ui_normal, "Segoe UI", "Segoe WP", Tahoma, Arial, sans-serif, serif, EmojiFont; font-size: 15px; margin: 0px;"><br class=""></div><div class="" style="color: rgb(33, 33, 33); font-family: wf_segoe-ui_normal, "Segoe UI", "Segoe WP", Tahoma, Arial, sans-serif, serif, EmojiFont; font-size: 15px; margin: 0px;"><font size="3" class="" style="font-family: Calibri, sans-serif, serif, EmojiFont;"><span class="" style="font-size: 12pt;"><font size="1" color="gray" class="" style="font-family: Verdana, sans-serif, serif, EmojiFont;"><span class="" style="font-size: 7.5pt;"><a href="mailto:yumeng.yan@cpr.ku.dk" class="OWAAutoLink" id="LPNoLP">yumeng.yan@cpr.ku.dk</a></span></font></span></font></div><div class="" style="color: rgb(33, 33, 33); font-family: wf_segoe-ui_normal, "Segoe UI", "Segoe WP", Tahoma, Arial, sans-serif, serif, EmojiFont; font-size: 15px; margin: 0px;"><font size="3" class="" style="font-family: Calibri, sans-serif, serif, EmojiFont;"><span class="" style="font-size: 12pt;"><font size="1" color="gray" class="" style="font-family: Verdana, sans-serif, serif, EmojiFont;"><br class=""></font></span></font></div><div class="" style="color: rgb(33, 33, 33); font-family: wf_segoe-ui_normal, "Segoe UI", "Segoe WP", Tahoma, Arial, sans-serif, serif, EmojiFont; font-size: 15px; margin: 0px;"><font size="3" class="" style="font-family: Calibri, sans-serif, serif, EmojiFont;"><span class="" style="font-size: 12pt;"><font size="1" color="gray" class="" style="font-family: Verdana, sans-serif, serif, EmojiFont;"><span id="cid:ccddf43b-cbbe-4084-ba85-4256acbdac26" class=""><OutlookEmoji-1638361915486c0a23484-e68c-4b46-9d5a-75949bd8128d.png></span><br class=""></font></span></font></div><p class="x_MsoNormal" style="margin: 0cm; font-size: 12pt; font-family: Calibri, sans-serif; color: rgb(33, 33, 33);"><span lang="EN-US" class="" style="font-size: 7.5pt; font-family: Verdana, sans-serif, serif, EmojiFont; color: gray;"></span></p><p class="" style="margin-top: 0px; margin-bottom: 0px;"></p></div></div></div><span class="" style="caret-color: rgb(0, 0, 0); font-family: Helvetica; font-size: 18px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; float: none; display: inline !important;">_______________________________________________</span><br class="" style="caret-color: rgb(0, 0, 0); font-family: Helvetica; font-size: 18px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none;"><span class="" style="caret-color: rgb(0, 0, 0); font-family: Helvetica; font-size: 18px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; float: none; display: inline !important;">ChimeraX-users mailing list</span><br class="" style="caret-color: rgb(0, 0, 0); font-family: Helvetica; font-size: 18px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none;"><a href="mailto:ChimeraX-users@cgl.ucsf.edu" class="" style="font-family: Helvetica; font-size: 18px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px;">ChimeraX-users@cgl.ucsf.edu</a><br class="" style="caret-color: rgb(0, 0, 0); font-family: Helvetica; font-size: 18px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none;"><span class="" style="caret-color: rgb(0, 0, 0); font-family: Helvetica; font-size: 18px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none; float: none; display: inline !important;">Manage subscription:</span><br class="" style="caret-color: rgb(0, 0, 0); font-family: Helvetica; font-size: 18px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none;"><a href="https://eur02.safelinks.protection.outlook.com/?url=https%3A%2F%2Fplato.cgl.ucsf.edu%2Fmailman%2Flistinfo%2Fchimerax-users&data=04%7C01%7Cyumeng.yan%40cpr.ku.dk%7C38dca19c368144a4ef9908d9d4925c08%7Ca3927f91cda14696af898c9f1ceffa91%7C0%7C0%7C637774547765921124%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C2000&sdata=gr5TimTGWiUpyRbZuVs9qu%2BWmS%2Fzky1bsYcEDxkmB8E%3D&reserved=0" originalsrc="https://www.rbvi.ucsf.edu/mailman/listinfo/chimerax-users" shash="CRFdEUv26pr4PazRjux5WbPNgNYc7BHTQdChcLurATuj7Bth99voGVG49kolKHmiCF5s5VJAfiLXrhGarWvIwqb5iWWH9S8+b1G7eSKl2ftTDjVwkbylHVgVlnBdv9C2w6wqACGzd+qpNEPXafI23KD11GTYkX3+/3pYd/AGn58=" class="" style="font-family: Helvetica; font-size: 18px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px;">https://www.rbvi.ucsf.edu/mailman/listinfo/chimerax-users</a></div></blockquote></div></div></div></div></div></blockquote></div><br class=""></div></body></html>