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<span style="font-size:12pt">Hi Winston,</span>
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<div style="font-size:12pt">The failure to open a MTZ file properly via the File/Open GUI is my fault, and something I'll be remedying with the next release of ISOLDE/Clipper. For now, you can do it at the command line using "open filename.mtz structureModel
#{model id}", or via the "Load crystallographic dataset" button on ISOLDE's GUI.</div>
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<div style="font-size:12pt">Best regards,</div>
<span style="font-size:12pt">Tristan</span><br>
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<div id="divRplyFwdMsg" dir="ltr"><font face="Calibri, sans-serif" style="font-size:11pt" color="#000000"><b>From:</b> ChimeraX-users <chimerax-users-bounces@cgl.ucsf.edu> on behalf of Wen-Jin Winston Wu via ChimeraX-users <chimerax-users@cgl.ucsf.edu><br>
<b>Sent:</b> 22 June 2021 17:14<br>
<b>To:</b> chimerax-users@cgl.ucsf.edu <chimerax-users@cgl.ucsf.edu><br>
<b>Subject:</b> [chimerax-users] Open a PDB-formatted file and a MTZ file</font>
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<p class="x_MsoNormal"><span lang="EN-US">Hi,</span></p>
<p class="x_MsoNormal"><span lang="EN-US"> </span></p>
<p class="x_MsoNormal"><span lang="EN-US">I am trying to inspect electron density of X-ray data.</span></p>
<p class="x_MsoNormal"><span lang="EN-US">I have the PDB-formatted coordinate file a.pdb (not been submitted to PDB yet) and a mtz file (a.mtz).</span></p>
<p class="x_MsoNormal"><span lang="EN-US">I have downloaded Clipper to Chimera X (1.2.5) running on Window 10.
</span></p>
<p class="x_MsoNormal"><span lang="EN-US"> </span></p>
<p class="x_MsoNormal"><span lang="EN-US">I have opened my a.pdb, and I then tried to open my a.mtz file from the File-Open and I specified the file type with “*.mtz”, and opened the a.mtz file, but I then got the error message: “Must specify a structure model
to associate with crystallographic data”.</span></p>
<p class="x_MsoNormal"><span lang="EN-US"> </span></p>
<p class="x_MsoNormal"><span lang="EN-US">I know that I was not doing it correctly (e.g. not typing proper commands with correct syntax.). I looked into the description in the URL below. However, I just could not get it work. Any help will be appreciated. Thanks!</span></p>
<p class="x_MsoNormal"><span lang="EN-US"> </span></p>
<p class="x_MsoNormal"><span lang="EN-US"><a href="http://rbvi.ucsf.edu/chimerax/docs/user/commands/open.html#clipper">http://rbvi.ucsf.edu/chimerax/docs/user/commands/open.html#clipper</a></span></p>
<p class="x_MsoNormal"><span lang="EN-US"> </span></p>
<p class="x_MsoNormal"><span lang="EN-US">Best wishes,</span><span lang="EN-US"><br>
<br>
Winston<br>
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</span><span lang="EN-US"></span></p>
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