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<p>Isn't this what Q-scores does?<br>
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<p><a href="https://www.nature.com/articles/s41592-020-0731-1">https://www.nature.com/articles/s41592-020-0731-1</a><br>
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<p>Best wishes,<br>
Reza<br>
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Reza Khayat, PhD
<div>Associate Professor </div>
<div>City College of New York</div>
<div>Department of Chemistry and Biochemistry</div>
<div>New York, NY 10031</div>
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<div id="divRplyFwdMsg" dir="ltr"><font face="Calibri, sans-serif" color="#000000" style="font-size:11pt"><b>From:</b> ChimeraX-users <chimerax-users-bounces@cgl.ucsf.edu> on behalf of Oliver Clarke <olibclarke@gmail.com><br>
<b>Sent:</b> Wednesday, May 19, 2021 9:58 AM<br>
<b>To:</b> Ioannis Skalidis<br>
<b>Cc:</b> chimerax-users@cgl.ucsf.edu<br>
<b>Subject:</b> [EXTERNAL] Re: [chimerax-users] Colour residues by local resolution estimation map</font>
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<div>Hi Yiannis,
<div class=""><br class="">
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<div class="">I am not sure whether this is possible in ChimeraX yet, but you can do this in Chimera using a combination of `Values at Atom Positions` and `Render by Attribute`.</div>
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<div class=""><a href="https://urldefense.proofpoint.com/v2/url?u=https-3A__www.cgl.ucsf.edu_chimera_docs_ContributedSoftware_density_density.html&d=DwMFaQ&c=4NmamNZG3KTnUCoC6InoLJ6KV1tbVKrkZXHRwtIMGmo&r=1DzJFW0v6TgEhkW1gy_-ke-RbtvS1fzEbD5_hcb9Up0&m=qUJvH5WM1Uut64mw5EYEiH3-YEyReOn0xpoA7yvhA-U&s=uZil8qWzh3fWtec_Fqpi76PvfP_xEH84sjxKOmU2NcM&e=" class="">https://www.cgl.ucsf.edu/chimera/docs/ContributedSoftware/density/density.html</a></div>
<div class=""><br class="">
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<div class=""><a href="https://urldefense.proofpoint.com/v2/url?u=https-3A__www.cgl.ucsf.edu_chimera_docs_ContributedSoftware_render_render.html&d=DwMFaQ&c=4NmamNZG3KTnUCoC6InoLJ6KV1tbVKrkZXHRwtIMGmo&r=1DzJFW0v6TgEhkW1gy_-ke-RbtvS1fzEbD5_hcb9Up0&m=qUJvH5WM1Uut64mw5EYEiH3-YEyReOn0xpoA7yvhA-U&s=EcDDHlqwuPUuSmFKeR9RKJqK4iCHIwkx5__4ARdhxzc&e=" class="">https://www.cgl.ucsf.edu/chimera/docs/ContributedSoftware/render/render.html</a></div>
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<div class="">Cheers</div>
<div class="">Oli<br class="">
<div><br class="">
<blockquote type="cite" class="">
<div class="">On May 19, 2021, at 9:22 AM, Ioannis Skalidis <<a href="mailto:johnskalidis@gmail.com" class="">johnskalidis@gmail.com</a>> wrote:</div>
<br class="Apple-interchange-newline">
<div class="">
<div class="">Dear all,<br class="">
<br class="">
I am trying to color a protein model based on the local resolution of the corresponding map. I can color the overall surface of the model, but not the residues themselves. Is there a way to do this, e.g, color the model backbone somehow?<br class="">
<br class="">
Thanks a lot for your help!<br class="">
<br class="">
Cheers,<br class="">
Yiannis<br class="">
<br class="">
-- <br class="">
<br class="">
<br class="">
<br class="">
Skalidis Ioannis, MSc<br class="">
Biochemistry & Cryo-EM Scientist<br class="">
PhD Candidate<br class="">
Kastritis Laboratory for Biomolecular Research<br class="">
Cryo-Electron Microscopy & Computational Structural Biology<br class="">
<br class="">
________________________________________________<br class="">
Martin-Luther-Universität Halle-Wittenberg<br class="">
Biozentrum, Room A.2.21<br class="">
IWE ZIK HALOmem NWG III<br class="">
"Kryo-Elektronenmikroskopie an Membranproteinkomplexen"<br class="">
Weinbergweg 22, 06120 Halle<br class="">
tel: +49 345 5524986<br class="">
web (Lab): <a href="https://urldefense.proofpoint.com/v2/url?u=https-3A__blogs.urz.uni-2Dhalle.de_kastritislab_&d=DwMFaQ&c=4NmamNZG3KTnUCoC6InoLJ6KV1tbVKrkZXHRwtIMGmo&r=1DzJFW0v6TgEhkW1gy_-ke-RbtvS1fzEbD5_hcb9Up0&m=qUJvH5WM1Uut64mw5EYEiH3-YEyReOn0xpoA7yvhA-U&s=F8u6f46yJPq4JGahIH83mWVmZ3geIKKmfDBflEErTrU&e=" class="">
https://blogs.urz.uni-halle.de/kastritislab/</a><br class="">
web (HALOmem): <a href="https://urldefense.proofpoint.com/v2/url?u=https-3A__www.halomem.de_en_&d=DwMFaQ&c=4NmamNZG3KTnUCoC6InoLJ6KV1tbVKrkZXHRwtIMGmo&r=1DzJFW0v6TgEhkW1gy_-ke-RbtvS1fzEbD5_hcb9Up0&m=qUJvH5WM1Uut64mw5EYEiH3-YEyReOn0xpoA7yvhA-U&s=oZIpdUBecbspvVsRFJJT9xsdY2yIXMivutjsIbCdHdk&e=" class="">
https://www.halomem.de/en/</a><br class="">
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