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Hi</div>
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This problem relates to surface area of a low-resolution EM map using ChimeraX</div>
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I have opened the following map and the corresponding model using the following commands in ChimeraX. </div>
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<span style="margin:0px;font-size:12pt">>>> open 4uq8; open 2676 from emdb</span><br>
<span style="margin:0px;font-size:12pt">>>> color #1 green; color zone #2 near #1 dist 4</span></div>
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As many parts of the map are unmodelled, I am interested 'how much of the map is unmodelled' in terms of surface area. This is mainly because the model is not accurate and I am trying to only use the raw-data (map) to estimate the surface area and avoid using
the model.</div>
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Is there a way to figure out how much of the map is unmodelled in terms of surface area? In this case, count the number of '<b>outer pixels of a map</b>' that are colored green or gray, at a given map contour? </div>
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Could you please help with a way to measure this <b>without </b>using the 'volume splitbyzone' command?</div>
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Thanks</div>
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Yaikhomba</div>
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<img size="724538" contenttype="image/png" unselectable="on" tabindex="-1" style="max-width: 100%; user-select: none;" data-outlook-trace="F:1|T:1" src="cid:71184965-9ba5-4374-82b3-bd2b264b4b0c"><br>
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