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<font face="Calibri, Helvetica, sans-serif">Dear ChimeraX team,</font></p>
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<span style="font-size:12.0pt;font-family:"Times New Roman",serif;mso-fareast-font-family:"Times New Roman";color:black;mso-fareast-language:EN-GB"><o:p><span style="font-size: 11pt; font-family: Calibri, Helvetica, sans-serif;"> </span></o:p></span></p>
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<span style="font-size: 11pt; font-family: Calibri, Helvetica, sans-serif; color: black; border: 1pt none windowtext; padding: 0cm; line-height: normal;">I am interested in generating Global diffusion tensor geometry models such as Prolate, Ellipsoid, Oblate
or Sphere with overlaid protein PDB or structure of my interest. (As shown in attached pic). I am using
</span><span style="font-size: 11pt; font-family: Calibri, Helvetica, sans-serif; color: rgb(32, 31, 30); line-height: normal;">diffusion tensor prediction module provided in
</span><span style="font-size: 11pt; font-family: Calibri, Helvetica, sans-serif; color: black; border: 1pt none windowtext; padding: 0cm; line-height: normal;">ROTDIF software (http://gandalf.umd.edu/FushmanLab/pdsw.html) to generate </span><span style="font-size: 11pt; font-family: Calibri, Helvetica, sans-serif; color: rgb(32, 31, 30); line-height: normal;">an
ellipsoid diffusion tensor of a protein molecule of my interest.</span><span style="font-size:12.0pt;font-family:"Times New Roman",serif;mso-fareast-font-family:"Times New Roman";color:#201F1E;mso-fareast-language:EN-GB"><o:p><span style="font-size: 11pt; line-height: normal; font-family: Calibri, Helvetica, sans-serif;"> </span></o:p></span></p>
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<span style="font-size: 11pt; font-family: Calibri, Helvetica, sans-serif; color: black; border: 1pt none windowtext; padding: 0cm; line-height: normal;">Is it possible that I can use ROTDIF generated output (Which is in Pymol output format, please find attached
) to open in ChimeraX with my protein PDB, to render such representative figure ?</span></p>
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<span style="font-size: 11pt; font-family: Calibri, Helvetica, sans-serif; color: black; border: 1pt none windowtext; padding: 0cm; background: white;">Thanks!!!</span><span style="font-size:12.0pt;font-family:"Times New Roman",serif;mso-fareast-font-family:"Times New Roman";color:black;mso-fareast-language:EN-GB"><o:p><span style="font-size: 11pt; font-family: Calibri, Helvetica, sans-serif;"> </span></o:p></span></p>
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<span style="font-size:12.0pt;font-family:"Times New Roman",serif;mso-fareast-font-family:"Times New Roman";color:black;border:none windowtext 1.0pt;mso-border-alt:none windowtext 0cm;padding:0cm;background:white;mso-fareast-language:EN-GB"><br>
</span><span style="font-size: 11pt; font-family: Calibri, Helvetica, sans-serif; color: black; border: 1pt none windowtext; padding: 0cm; background: white;">Arun</span><span style="font-size:12.0pt;font-family:"Times New Roman",serif;mso-fareast-font-family:"Times New Roman";color:black;mso-fareast-language:EN-GB"><o:p><span style="font-size: 11pt; font-family: Calibri, Helvetica, sans-serif;"> </span></o:p></span></p>
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<span style="font-family:Calibri,Helvetica,sans-serif; color:rgb(56,56,56); font-size:10pt">Arun Gupta PhD, MRSC</span></p>
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