[chimerax-users] Bio-Formats with ChimeraX?

Matthew Akamatsu matt.akamatsu at berkeley.edu
Wed Feb 6 21:02:07 PST 2019


Hi,

I just started using ChimeraX to render and save 3D time lapse microscopy
data as a high-performance replacement of Fiji. I am wondering how flexible
ChimeraX can be in opening different TIF-derived file formats -
particularly hyperstacks (multi color, multi Z, multi time). Other desired
formats would be proprietary formats like .nd2 and .sld .  Bio-Formats does
all of this in an open-source manner - how feasible would it be to have
bio-formats type functionality in ChimeraX?

Thanks,
Matt
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