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Dear Chimera-user group,</div>
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I am using Chimera version 1.14. After I have manually place the PDB model in the volume file, I would like to calculate the correlation value between the current position of PDB file and the volume. I have used "Fit dialog" and "use simulated map" but the
correlation value only displayed the optimized value after shift and rotation. I have also disabled "rotation" and "shift" but the results were the same.</div>
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Because my volume contains more proteins than the PDB files, the "Fit in map" always place the PDB files into the densities corresponding to other proteins. I just want to have the correlation value between the manually placed PDB and the volume. How could
I do this in Chimera? </div>
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Thanks,</div>
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<span style="font-family:Tahoma,Geneva,sans-serif">Long Gui, Ph.D. </span></div>
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<div><span style="font-family:Tahoma,Geneva,sans-serif">Postdoc Researcher, Nicastro Lab</span></div>
<div><span style="font-family:Tahoma,Geneva,sans-serif">University of Texas Southwestern Medical Center </span></div>
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<div><span style="font-family:Tahoma,Geneva,sans-serif">Long.Gui@utsouthwestern.edu</span></div>
<div><span style="font-family:Tahoma,Geneva,sans-serif">Tel: (214)-645-1561 </span></div>
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