<html>
<head>
<meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
</head>
<body>
<p>(this advice is for Linux installations)<br>
</p>
<p>FYI, to find out the actual path to chimera, run "which chimera"
in a terminal window. Typically, it will respond with
/usr/bin/chimera or /usr/local/bin/chimera, and that is the path
you'll use. That presupposes that chimera is installed on your
system by a system administrator. If the which program responds
with "which: no chimera in ...", then you'll need to ask your
system administrator or examine the shortcut you use to start
chimera. If you installed a personal copy of chimera, then it
will be in your .local directory, ie.,
~/.local/UCSF-Chimera64-1.15/bin/chimera.</p>
<p> HTH,<br>
</p>
<p> Greg<br>
</p>
<div class="moz-cite-prefix">On 6/30/2021 6:16 AM, Scooter Morris
via Chimera-users wrote:<br>
</div>
<blockquote type="cite"
cite="mid:91da0c3f-ea84-137d-e451-5e250466d514@cgl.ucsf.edu">
<meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
<p>Hi Sruthi,</p>
<p>Looks like you are on a Linux machine. If so, the correct path
should be /home/students/chimera/bin/chimera (i.e. the path to
actual program). I'm not 100% sure that you need the last
"chimera" at the end, though.</p>
<p>-- scooter<br>
</p>
<div class="moz-cite-prefix">On 6/29/21 10:38 PM, SRUTHI NAMBIAR
via Chimera-users wrote:<br>
</div>
<blockquote type="cite"
cite="mid:CAGdMnobmt-TJyJ2L+725TA2n-7gamajUjkJLH9_uh5h4yHLtnQ@mail.gmail.com">
<meta http-equiv="content-type" content="text/html;
charset=UTF-8">
<div dir="ltr">
<div>Dear all, <br>
</div>
<div><br>
</div>
<div>I have been using chimera for the past 1 year and
recently wanted to club it along with the cytoscape
software. But whenever I try to launch chimera through the
structureviz app, I get the following message: </div>
<div>Error message: Cannot run program
"/home/students/chimera/": error=13, Permission denied</div>
<div>I have changed the settings of structureviz to give the
path of chimera which is /home/students/chimera. Still this
error is occurring. Could someone help regarding the same?</div>
<div><br>
</div>
<div>Thank you. <br>
</div>
<div>Regards, <br>
</div>
<div>Sruthi<br>
</div>
</div>
<br>
<fieldset class="mimeAttachmentHeader"></fieldset>
<pre class="moz-quote-pre" wrap="">_______________________________________________
Chimera-users mailing list: <a class="moz-txt-link-abbreviated" href="mailto:Chimera-users@cgl.ucsf.edu" moz-do-not-send="true">Chimera-users@cgl.ucsf.edu</a>
Manage subscription: <a class="moz-txt-link-freetext" href="https://plato.cgl.ucsf.edu/mailman/listinfo/chimera-users" moz-do-not-send="true">https://plato.cgl.ucsf.edu/mailman/listinfo/chimera-users</a>
</pre>
</blockquote>
<br>
<fieldset class="mimeAttachmentHeader"></fieldset>
<pre class="moz-quote-pre" wrap="">_______________________________________________
Chimera-users mailing list: <a class="moz-txt-link-abbreviated" href="mailto:Chimera-users@cgl.ucsf.edu">Chimera-users@cgl.ucsf.edu</a>
Manage subscription: <a class="moz-txt-link-freetext" href="https://plato.cgl.ucsf.edu/mailman/listinfo/chimera-users">https://plato.cgl.ucsf.edu/mailman/listinfo/chimera-users</a>
</pre>
</blockquote>
</body>
</html>