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<p class="MsoNormal">Hello, I’m trying to measure contacts between a protein and a peptide using Chimera. I have to do this with different angstroms distances, 2, 3 and 4 Å. I'm using the command line:</p>
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<p class="MsoNormal">findclash :.A test :. B overlap -0.4 hbond 0.0 namingStyle simple save</p>
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<p class="MsoNormal">However I don’t know exactly how to modify the overlap to the desired distances.</p>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal">Which values can I use to measure contacts within 2, 3 and 4 Å.</p>
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<p class="MsoNormal">Thanks in advance,</p>
<p class="MsoNormal">Arthur Pereira </p>
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