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Thanks Elaine! Well you answered well before others in the team. 👍</div>
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<div>On Apr 1, 2021 at 8:02 PM, <<a href="mailto:meng@cgl.ucsf.edu">Elaine Meng</a>> wrote:<br>
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<pre>Hey, I'm not the only one who answers these questions! :-)
It is explained in the "Fit in Map" manual page:
<<a href="https://urldefense.com/v3/__https://www.rbvi.ucsf.edu/chimera/docs/ContributedSoftware/fitmaps/fitmaps.html*matrices__;Iw!!JqxBPMk!xxVnA8H7hYuofVFeoHwHPo-TJhHwl52Ro3yS2YPnrup56wIKqpeuq-rtH-PilKRZ3g$" dir="ltr" x-apple-data-detectors="true" x-apple-data-detectors-type="link" x-apple-data-detectors-result="1">https://urldefense.com/v3/__https://www.rbvi.ucsf.edu/chimera/docs/ContributedSoftware/fitmaps/fitmaps.html*matrices__;Iw!!JqxBPMk!xxVnA8H7hYuofVFeoHwHPo-TJhHwl52Ro3yS2YPnrup56wIKqpeuq-rtH-PilKRZ3g$</a> >
"The transformation matrix of the fit model relative to the reference map is reported in the Reply Log. The first three columns of the matrix describe a rotation and the fourth describes a translation (performed after the rotation)."
I hope this helps,
Elaine
-----
Elaine C. Meng, Ph.D.
UCSF Chimera(X) team
Department of Pharmaceutical Chemistry
University of California, San Francisco
> On Apr 1, 2021, at 3:46 PM, Ashok Nayak <<a href="mailto:Ashok.Nayak@vcuhealth.org" dir="ltr" x-apple-data-detectors="true" x-apple-data-detectors-type="link" x-apple-data-detectors-result="4">Ashok.Nayak@vcuhealth.org</a>> wrote:
>
> HI Elaine,
> I want to know the rotation and translation components along x,y and z separately from the rotation matrix obtained from chimera reply log upon fitting a model into a map. Will it be possible to know?
>
> Matrix rotation and translation
> 1.00000000 -0.00000000 -0.00000000 1.83458738
> -0.00000000 1.00000000 -0.00000000 1.15016978
> -0.00000000 -0.00000000 1.00000000 -0.53835221
> Axis 0.00000000 0.00000000 1.00000000
> Axis point 0.00000000 0.00000000 0.00000000
> Rotation angle (degrees) 0.00000000
> Shift along axis -0.53835221
>
> thanks,
> Ashok
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