<html xmlns:o="urn:schemas-microsoft-com:office:office" xmlns:w="urn:schemas-microsoft-com:office:word" xmlns:m="http://schemas.microsoft.com/office/2004/12/omml" xmlns="http://www.w3.org/TR/REC-html40"><head><meta http-equiv=Content-Type content="text/html; charset=utf-8"><meta name=Generator content="Microsoft Word 15 (filtered medium)"><style><!--
/* Font Definitions */
@font-face
{font-family:"Cambria Math";
panose-1:2 4 5 3 5 4 6 3 2 4;}
@font-face
{font-family:Calibri;
panose-1:2 15 5 2 2 2 4 3 2 4;}
/* Style Definitions */
p.MsoNormal, li.MsoNormal, div.MsoNormal
{margin:0cm;
font-size:11.0pt;
font-family:"Calibri",sans-serif;}
a:link, span.MsoHyperlink
{mso-style-priority:99;
color:blue;
text-decoration:underline;}
.MsoChpDefault
{mso-style-type:export-only;}
@page WordSection1
{size:612.0pt 792.0pt;
margin:2.0cm 42.5pt 2.0cm 3.0cm;}
div.WordSection1
{page:WordSection1;}
--></style></head><body lang=RU link=blue vlink="#954F72"><div class=WordSection1><p class=MsoNormal><span lang=EN-US>Dear Elaine,<o:p></o:p></span></p><p class=MsoNormal><span lang=EN-US><o:p> </o:p></span></p><p class=MsoNormal><span lang=EN-US>By ‘model’ I mean coordinate file that is build up by coot/phenix for fitting into the volume map.<o:p></o:p></span></p><p class=MsoNormal><span lang=EN-US>The ‘vop zflip’ works for the volume maps</span></p><p class=MsoNormal><o:p> </o:p></p><p class=MsoNormal><o:p> </o:p></p><p class=MsoNormal><span lang=EN-US>Any options how to flip the coordinate map?</span></p><p class=MsoNormal><o:p> </o:p></p><p class=MsoNormal><o:p> </o:p></p><p class=MsoNormal><span lang=EN-US>Thank you!</span></p><p class=MsoNormal><o:p> </o:p></p><p class=MsoNormal><span lang=EN-US>Sincerely,</span></p><p class=MsoNormal><span lang=EN-US>Dmitry</span></p><p class=MsoNormal><o:p> </o:p></p><div style='mso-element:para-border-div;border:none;border-top:solid #E1E1E1 1.0pt;padding:3.0pt 0cm 0cm 0cm'><p class=MsoNormal style='border:none;padding:0cm'><b>От: </b><a href="mailto:meng@cgl.ucsf.edu">Elaine Meng</a><br><b>Отправлено: </b>2 сентября 2020 г. в 19:07<br><b>Кому: </b><a href="mailto:semchonok@gmail.com">Dmitry Semchonok</a><br><b>Копия: </b><a href="mailto:chimera-users@cgl.ucsf.edu">Chimera</a><br><b>Тема: </b>Re: [Chimera-users] flipping model in chimera</p></div><p class=MsoNormal><o:p> </o:p></p><p class=MsoNormal>Hi Dmitry,</p><p class=MsoNormal>It depends what you mean by "model" but for maps in Chimera there is a "vop zflip" command for flipping about the Z axis only:</p><p class=MsoNormal><http://www.rbvi.ucsf.edu/chimera/docs/UsersGuide/midas/vop.html#zFlip></p><p class=MsoNormal><o:p> </o:p></p><p class=MsoNormal>There is no option to do this for other types of models.</p><p class=MsoNormal><o:p> </o:p></p><p class=MsoNormal>ChimeraX map flipping ("volume flip") can use other axes, not just Z:</p><p class=MsoNormal><http://rbvi.ucsf.edu/chimerax/docs/user/commands/volume.html#flip></p><p class=MsoNormal><o:p> </o:p></p><p class=MsoNormal>I hope this helps,</p><p class=MsoNormal>Elaine</p><p class=MsoNormal>-----</p><p class=MsoNormal>Elaine C. Meng, Ph.D. </p><p class=MsoNormal>UCSF Chimera(X) team</p><p class=MsoNormal>Department of Pharmaceutical Chemistry</p><p class=MsoNormal>University of California, San Francisco</p><p class=MsoNormal><o:p> </o:p></p><p class=MsoNormal><o:p> </o:p></p><p class=MsoNormal><o:p> </o:p></p><p class=MsoNormal><o:p> </o:p></p><p class=MsoNormal>> On Sep 2, 2020, at 8:40 AM, Dmitry Semchonok <semchonok@gmail.com> wrote:</p><p class=MsoNormal>> </p><p class=MsoNormal>> Dear colleagues,</p><p class=MsoNormal>> </p><p class=MsoNormal>> How to flip the model in chimera?</p><p class=MsoNormal>> </p><p class=MsoNormal>> Thank you!</p><p class=MsoNormal>> </p><p class=MsoNormal>> Sincerely.</p><p class=MsoNormal>> Dmitry</p><p class=MsoNormal>> </p><p class=MsoNormal>> </p><p class=MsoNormal>> Отправлено из приложения "Почта" для Windows 10</p><p class=MsoNormal>> </p><p class=MsoNormal>> _______________________________________________</p><p class=MsoNormal>> Chimera-users mailing list: Chimera-users@cgl.ucsf.edu</p><p class=MsoNormal>> Manage subscription: https://plato.cgl.ucsf.edu/mailman/listinfo/chimera-users</p><p class=MsoNormal><o:p> </o:p></p><p class=MsoNormal><o:p> </o:p></p></div></body></html>