<html><head><meta http-equiv="Content-Type" content="text/html; charset=us-ascii"></head><body style="word-wrap: break-word; -webkit-nbsp-mode: space; line-break: after-white-space;" class=""><div dir="auto" style="word-wrap: break-word; -webkit-nbsp-mode: space; line-break: after-white-space;" class=""><div class=""><br class=""></div>You could try Segment Map followed by Fit to Segments (both in the Tools -> Volume Data menu). More details and a tutorial here if needed:<div class=""><div class=""><a href="https://cryoem.slac.stanford.edu/ncmi/resources/software/segger" class="">https://cryoem.slac.stanford.edu/ncmi/resources/software/segger</a></div><div class=""><div class=""><br class=""></div><div class="">Greg</div><div class=""><br class=""><div><br class=""><blockquote type="cite" class=""><div class="">On Apr 22, 2020, at 8:24 AM, Dieter Blaas <<a href="mailto:dieter.blaas@meduniwien.ac.at" class="">dieter.blaas@meduniwien.ac.at</a>> wrote:</div><br class="Apple-interchange-newline"><div class=""><div class="">Hi,<br class=""><br class=""> I always spend many hours placing a pdb model into a density map of a virus with Tools > Volume Data > Fit in Map. Usually I have to move the model around to find a more or less good fit manually, otherwise Chimera does not find anything. I also tried by first making a molmap followed by something like 'fitmap #0 #1 resolution 4'. I am convinced that there is a better way of doing this but so far I was unable to find it. Can anybody please give me a quick hint!<br class=""><br class="">Thanks, Dieter<br class=""><br class="">------------------------------------------------------------------------<br class="">Dieter Blaas,<br class="">Max Perutz Laboratories<br class="">Medical University of Vienna,<br class="">Inst. Med. Biochem., Vienna Biocenter (VBC),<br class="">Dr. Bohr Gasse 9/3,<br class="">A-1030 Vienna, Austria,<br class="">Tel: 0043 1 4277 61630,<br class="">Mobile: 0043 699 1942 1659<br class=""><a href="mailto:dieter.blaas@meduniwien.ac.at" class="">e-mail: dieter.blaas@meduniwien.ac.at</a><br class="">------------------------------------------------------------------------<br class=""><br class="">_______________________________________________<br class="">Chimera-users mailing list: Chimera-users@cgl.ucsf.edu<br class="">Manage subscription: http://plato.cgl.ucsf.edu/mailman/listinfo/chimera-users<br class=""></div></div></blockquote></div><br class=""></div></div></div></div></body></html>