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Dear Chimera Developers,</div>
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I have a question when I use Chimera these days. I was looking for the residues that interact with my ligand. I notice that when I open the pdb, it will show the residues' side chains automatically. I am wondering how you select those residues (by what principle
that you decide it is interacting with ligand). And is there a list for the residues? I want to marked out the amino acids on my sequence but it is very hard to count all of them. I hope to get help from you. Thank you very much!</div>
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Best,</div>
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Bixia</div>
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<div id="divRplyFwdMsg" dir="ltr"><font face="Calibri, sans-serif" style="font-size:11pt" color="#000000"><b>From:</b> Zhang, Bixia <bixia.zhang@wsu.edu><br>
<b>Sent:</b> Friday, September 27, 2019 10:11<br>
<b>To:</b> chimera-users@cgl.ucsf.edu <chimera-users@cgl.ucsf.edu><br>
<b>Subject:</b> Re: Question about selecting residues</font>
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Dear Chimera Developers,</div>
<div style="margin:0px; font-size:12pt; font-family:Calibri,Arial,Helvetica,sans-serif; background-color:rgb(255,255,255)">
I have a question when I use Chimera these days. I was looking for the residues that interact with my ligand. I notice that when I open the pdb, it will show the residues' side chains automatically. I am wondering how you select those residues (by what principle
that you decide it is interacting with ligand). And is there a list for the residues? I want to marked out the amino acids on my sequence but it is very hard to count all of them. I hope to get help from you. Thank you very much!</div>
<div style="margin:0px; font-size:12pt; font-family:Calibri,Arial,Helvetica,sans-serif; background-color:rgb(255,255,255)">
Best,</div>
<div style="margin:0px; font-size:12pt; font-family:Calibri,Arial,Helvetica,sans-serif; background-color:rgb(255,255,255)">
Bixia</div>
<br>
</div>
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<div id="x_divRplyFwdMsg" dir="ltr"><font face="Calibri, sans-serif" color="#000000" style="font-size:11pt"><b>From:</b> Zhang, Bixia<br>
<b>Sent:</b> Friday, September 27, 2019 10:06<br>
<b>To:</b> chimera-users@cgl.ucsf.edu <chimera-users@cgl.ucsf.edu><br>
<b>Subject:</b> Question about selecting residues</font>
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Dear Chimera Developers,</div>
<div style="font-family:Calibri,Arial,Helvetica,sans-serif; font-size:12pt; color:rgb(0,0,0)">
I have a question when I use Chimera these days. I was looking for the residues that interact with my ligand. I notice that when I open the pdb, it will show the residues' side chains automatically. I am wondering how you select those residues (by what principle
that you decide it is interacting with ligand). And is there a list for the residues? I want to marked out the amino acids on my sequence but it is very hard to count all of them. I hope to get help from you. Thank you very much!</div>
<div style="font-family:Calibri,Arial,Helvetica,sans-serif; font-size:12pt; color:rgb(0,0,0)">
Best,</div>
<div style="font-family:Calibri,Arial,Helvetica,sans-serif; font-size:12pt; color:rgb(0,0,0)">
Bixia</div>
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