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<p class="x_MsoNormal">If you move and save a volume and reopen it, it does not appear in new place but rather original place. If you move and save a .ent/.pdb and reopen it, it appears in new place.</p>
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<p class="x_MsoNormal">Sent from <a href="https://go.microsoft.com/fwlink/?LinkId=550986">
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<div id="x_divRplyFwdMsg" dir="ltr"><font face="Calibri, sans-serif" color="#000000" style="font-size:11pt"><b>From:</b> Elaine Meng <meng@cgl.ucsf.edu><br>
<b>Sent:</b> Wednesday, June 26, 2019 9:20:21 AM<br>
<b>To:</b> Ryan Harlich<br>
<b>Cc:</b> chimera-users@cgl.ucsf.edu<br>
<b>Subject:</b> Re: [Chimera-users] Saving .pdb file in location of .mrc file</font>
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<div class="PlainText">For the others on the list,<br>
although I’m not sure what solution you hit upon, the issue is discussed here, in “Saving Maps after Fitting” (bottom of page):<br>
<br>
<<a href="http://www.rbvi.ucsf.edu/chimera/docs/UsersGuide/savemodel.html#afterfitting">http://www.rbvi.ucsf.edu/chimera/docs/UsersGuide/savemodel.html#afterfitting</a>><br>
<br>
Elaine<br>
-----<br>
Elaine C. Meng, Ph.D.<br>
UCSF Chimera(X) team<br>
Department of Pharmaceutical Chemistry<br>
University of California, San Francisco<br>
<br>
> On Jun 25, 2019, at 6:49 PM, Ryan Harlich <ryanharlich@hotmail.com> wrote:<br>
> <br>
> Hi Chimera,<br>
> <br>
> I was able to figure this out after several hours. You can disregard the below email.<br>
> <br>
> Best,<br>
> Ryan Harlich<br>
> <br>
> Sent from Mail for Windows 10<br>
> <br>
> From: Ryan Harlich<br>
> Sent: Tuesday, June 25, 2019 4:46:11 PM<br>
> To: chimera-users@cgl.ucsf.edu<br>
> Subject: Saving .pdb file in location of .mrc file<br>
> <br>
> Hi Chimera,<br>
> <br>
> I am having a bit of difficulty figuring out how to move the location of a map and save it in that location. I am able to move it but when I save and reopen it is back to where it is. I see I can use molmap and use onGrid to achieve this but this overwrites
gridSpacing 1 which is crucial as I need to set the resolution to 1.<br>
> <br>
> So the problem is when I save a molmap with gridSpacing after performing move cofr and reopen it, it is not in the location of my .mrc. If I use onGrid I cannot achieve gridSpacing 1.<br>
> <br>
> An alternative if possible would be to have the .ent/.pdb saved to the new location where the .mrc density map is and reopened to this same location because then I can do the rest from there.<br>
> <br>
> Best,<br>
> Ryan Harlich<br>
> <br>
> Sent from Mail for Windows 10<br>
> <br>
> _______________________________________________<br>
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